RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	ACTL10	Q5JWF8	245 aa		11.65	□□□□□ -0.54
TMEM259-206	ENST00000589055	NOXA1	Q86UR1	476 aa		11.65	□□□□□ -0.54
TMEM259-206	ENST00000589055	PBDC1	Q9BVG4	233 aa		11.65	□□□□□ -0.54
TMEM259-206	ENST00000589055	MAGT1	Q9H0U3	335 aa		11.65	□□□□□ -0.54
TMEM259-206	ENST00000589055	PAIP2B	Q9ULR5	123 aa	Known RBP	11.65	□□□□□ -0.54
TMEM259-206	ENST00000589055	HELT	A6NFD8	242 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	SFT2D2	O95562	160 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	LY6G6C	O95867	125 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	HOXB5	P09067	269 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	BAK1	Q16611	211 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	RNF125	Q96EQ8	232 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	CLEC5A	Q9NY25	188 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	CACFD1	Q9UGQ2	172 aa		11.64	□□□□□ -0.55
TMEM259-206	ENST00000589055	LINC00854	A0A1B0GVQ3	168 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	DUXB	A0A1W2PPF3	345 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	ZFP92	A6NM28	416 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	BUB3	O43684	328 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	ATF4	P18848	351 aa	Predicted RBP	11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	DEFB1	P60022	68 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	OR2F1	Q13607	317 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	SIGLEC15	Q6ZMC9	328 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	CENPS	Q8N2Z9	138 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	TMEM217	Q8N7C4	229 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	LRTM2	Q8N967	370 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	SLC35E1	Q96K37	410 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	C11orf68	Q9H3H3	251 aa	Known RBP	11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	FBXL17	Q9UF56	701 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	FLVCR2	Q9UPI3	526 aa		11.63	□□□□□ -0.55
TMEM259-206	ENST00000589055	FAM90A26	D6RGX4	464 aa		11.62	□□□□□ -0.55
TMEM259-206	ENST00000589055	EIF2B2	P49770	351 aa	Known RBP	11.62	□□□□□ -0.55
TMEM259-206	ENST00000589055	SPANXN2	Q5MJ10	180 aa		11.62	□□□□□ -0.55
TMEM259-206	ENST00000589055	NRN1	Q9NPD7	142 aa		11.62	□□□□□ -0.55
TMEM259-206	ENST00000589055	IGKV1OR2-108	A0A075B7D4	117 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	WRB	O00258	174 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	ADAP1	O75689	374 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	GPX4	P36969	197 aa	Predicted RBP	11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	LYZ	P61626	148 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	GGNBP1	Q5YKI7	109 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055		Q8NAQ8	132 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	RAB40C	Q96S21	281 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	SDHC	Q99643	169 aa	Predicted RBP	11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	TMED3	Q9Y3Q3	217 aa		11.61	□□□□□ -0.55
TMEM259-206	ENST00000589055	KMT2A	Q03164	3969 aa		11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055	IGHV4-28	A0A0C4DH34	117 aa		11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055		H3BP45	60 aa		11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055	ZNF701	M0R085	212 aa	Predicted RBP	11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055	TRIQK	Q629K1	86 aa		11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055	C11orf45	Q8TAV5	145 aa		11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055	WDR12	Q9GZL7	423 aa	Known RBP	11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055	KLK5	Q9Y337	293 aa	Predicted RBP	11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055		X6R8D5	127 aa		11.6	□□□□□ -0.55
TMEM259-206	ENST00000589055	C9orf170	A2RU37	121 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	PRSS46	E5RG02	174 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	SYNGR2	O43760	224 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	RBMY1A1	P0DJD3	496 aa	Known RBP	11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	RBMY1C	P0DJD4	496 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	SPP1	P10451	314 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	SLC25A6	P12236	298 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	BTC	P35070	178 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	AP2S1	P53680	142 aa	Predicted RBP	11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	RAB11A	P62491	216 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	RBMY1F	Q15415	496 aa	Known RBP	11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	GDF5OS	Q5U4N7	250 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	MORN3	Q6PF18	240 aa	Predicted RBP	11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	DEDD2	Q8WXF8	326 aa		11.59	□□□□□ -0.55
TMEM259-206	ENST00000589055	NDUFB6	O95139	128 aa		11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	GATA2	P23769	480 aa	Predicted RBP	11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	INPP1	P49441	399 aa		11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	ATP5I	P56385	69 aa	Predicted RBP	11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	SPANXN5	Q5MJ07	72 aa		11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	OR8G2P	Q6IF36	304 aa		11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	CSNK1G2-AS1	Q8NCQ2	148 aa		11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	TRGV9	Q99603	122 aa		11.58	□□□□□ -0.56
TMEM259-206	ENST00000589055	PIGBOS1	A0A0B4J2F0	54 aa		11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	MED6	O75586	246 aa		11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	ANXA7	P20073	488 aa	Known RBP	11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	SNRPD3	P62318	126 aa	Known RBP	11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	RPP25L	Q8N5L8	163 aa	Known RBP	11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	THAP8	Q8NA92	274 aa		11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	VPS13D	Q5THJ4	4388 aa		11.57	□□□□□ -0.56
TMEM259-206	ENST00000589055	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055		H3BMM0	161 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	SOCS3	O14543	225 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	DEDD	O75618	318 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	IGKV3-20	P01619	116 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	FXYD7	P58549	80 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	UBE2M	P61081	183 aa	Known RBP	11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	POLR2G	P62487	172 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	ACOT7L	Q6ZUV0	252 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	PPP1R14B	Q96C90	147 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	LINC00052	Q96N35	136 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	CIB3	Q96Q77	187 aa	Predicted RBP	11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	XCL2	Q9UBD3	114 aa		11.56	□□□□□ -0.56
TMEM259-206	ENST00000589055	KIAA1109	Q2LD37	5005 aa		11.55	□□□□□ -0.56
TMEM259-206	ENST00000589055	NAP1L6	A6NFF2	107 aa		11.55	□□□□□ -0.56
TMEM259-206	ENST00000589055	SNRPGP15	A8MWD9	76 aa		11.55	□□□□□ -0.56

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