RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 IL4P05112 153 aa14.37□□□□□ -0.11
CLPTM1-209ENST00000588855 C8orf88P0DMB2 117 aa14.37□□□□□ -0.11
CLPTM1-209ENST00000588855 VWC2Q2TAL6 325 aa14.37□□□□□ -0.11
CLPTM1-209ENST00000588855 DYNLRB2Q8TF09 96 aa14.37□□□□□ -0.11
CLPTM1-209ENST00000588855 MRPL27Q9P0M9 148 aaKnown RBP14.37□□□□□ -0.11
CLPTM1-209ENST00000588855 LSM4Q9Y4Z0 139 aaKnown RBP14.37□□□□□ -0.11
CLPTM1-209ENST00000588855 HSPB11Q9Y547 144 aa14.37□□□□□ -0.11
CLPTM1-209ENST00000588855 IGHV3-49A0A0A0MS15 119 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 SMLR1H3BR10 107 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 FABP1P07148 127 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 GATA2P23769 480 aaPredicted RBP14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 CLINT1Q14677 625 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 USF2Q15853 346 aaPredicted RBP14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 TEPPQ6URK8 271 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 BTNL8Q6UX41 500 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 TMEM182Q6ZP80 229 aaPredicted RBP14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 OR51G1Q8NGK1 321 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 MARC2Q969Z3 335 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 MLXQ9UH92 298 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 IGHV3OR16-13A0A075B7E8 117 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 FXYD6-FXYD2A0A087WZ82 144 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 IGHV3-74A0A0B4J1X5 117 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 IGHV7-4-1A0A0J9YVY3 117 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 KRTAP10-11P60412 298 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 EGFEM1PQ0D2K5 195 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 ATP6V1FQ16864 119 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 KPRPQ5T749 579 aaPredicted RBP14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 CYP2G1PQ6ZSU1 146 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 RNF125Q96EQ8 232 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 WDR83OSQ9Y284 106 aa14.36□□□□□ -0.11
CLPTM1-209ENST00000588855 A0A1B0GVG6 124 aa14.35□□□□□ -0.11
CLPTM1-209ENST00000588855 WI2-2373I1.2A0A1W2PRP0 233 aa14.35□□□□□ -0.11
CLPTM1-209ENST00000588855 APOHP02749 345 aaPredicted RBP14.35□□□□□ -0.11
CLPTM1-209ENST00000588855 MGST2Q99735 147 aa14.35□□□□□ -0.11
CLPTM1-209ENST00000588855 SMPXQ9UHP9 88 aa14.35□□□□□ -0.11
CLPTM1-209ENST00000588855 FBN3Q75N90 2809 aa14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 MEGF8Q7Z7M0 2845 aa14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 LYZP61626 148 aa14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 DEFB114Q30KQ6 69 aa14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 CD300EQ496F6 205 aaPredicted RBP14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 METTL26Q96S19 204 aa14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 PBDC1Q9BVG4 233 aa14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 SMIM3Q9BZL3 60 aa14.34□□□□□ -0.11
CLPTM1-209ENST00000588855 IZUMO1RA6ND01 250 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 CHEK1O14757 476 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 AGPAT2O15120 278 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 NPPCP23582 126 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 CRYBB3P26998 211 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 BPIFCQ8NFQ6 507 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 AQP10Q96PS8 301 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 RHPN1-AS1Q9BWJ2 59 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 TECRQ9NZ01 308 aaKnown RBP14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 SORL1Q92673 2214 aa14.33□□□□□ -0.12
CLPTM1-209ENST00000588855 IGHV3-66A0A0C4DH42 116 aa14.32□□□□□ -0.12
CLPTM1-209ENST00000588855 FGF7P21781 194 aa14.32□□□□□ -0.12
CLPTM1-209ENST00000588855 ZNF546Q86UE3 836 aa14.32□□□□□ -0.12
CLPTM1-209ENST00000588855 ST8SIA2Q92186 375 aa14.32□□□□□ -0.12
CLPTM1-209ENST00000588855 ATP5SQ99766 215 aa14.32□□□□□ -0.12
CLPTM1-209ENST00000588855 RABAC1Q9UI14 185 aa14.32□□□□□ -0.12
CLPTM1-209ENST00000588855 TNFSF18Q9UNG2 199 aa14.32□□□□□ -0.12
CLPTM1-209ENST00000588855 RNF222A6NCQ9 220 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 HNRNPCP07910 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 LINC00869P0C866 280 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 NUP62P37198 522 aaPredicted RBP14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 CAMLGP49069 296 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 SELENOTP62341 195 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 TMEM61Q8N0U2 210 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 ST6GAL2Q96JF0 529 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 RNF2Q99496 336 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 GGTLC1Q9BX51 225 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 VSIRQ9H7M9 311 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 SLC45A2Q9UMX9 530 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 CFDP00746 253 aaPredicted RBP14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 PRB2P02812 416 aaPredicted RBP14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 LCN12Q6JVE5 192 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 OR2K2Q8NGT1 345 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 WFDC1Q9HC57 220 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 FBXL17Q9UF56 701 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 U3KQE9 123 aa14.31□□□□□ -0.12
CLPTM1-209ENST00000588855 INO80EQ8NBZ0 244 aaPredicted RBP14.3□□□□□ -0.12
CLPTM1-209ENST00000588855 DOK5Q9P104 306 aa14.3□□□□□ -0.12
CLPTM1-209ENST00000588855 ZNF256Q9Y2P7 627 aaPredicted RBP14.3□□□□□ -0.12
CLPTM1-209ENST00000588855 MPDU1O75352 247 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 DFFBO76075 338 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 ORM2P19652 201 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 EIF2B2P49770 351 aaKnown RBP14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 RAB31Q13636 194 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 OPCMLQ14982 345 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 STPG3Q8N7X2 389 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 OR1B1Q8NGR6 318 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 NARS2Q96I59 477 aaKnown RBP14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 PRR25Q96S07 402 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 NPCDR1Q9BY65 106 aa14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 WDR61Q9GZS3 305 aaKnown RBP14.29□□□□□ -0.12
CLPTM1-209ENST00000588855 A0A1W2PS18 150 aa14.28□□□□□ -0.12
CLPTM1-209ENST00000588855 ARPC5O15511 151 aa14.28□□□□□ -0.12
CLPTM1-209ENST00000588855 BMI1P35226 326 aa14.28□□□□□ -0.12
CLPTM1-209ENST00000588855 AP2S1P53680 142 aaPredicted RBP14.28□□□□□ -0.12
CLPTM1-209ENST00000588855 MIC13Q5XKP0 118 aa14.28□□□□□ -0.12
CLPTM1-209ENST00000588855 OR11H4Q8NGC9 324 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms