RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 FAM213BQ8TBF2 198 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 MGST2Q99735 147 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 THYN1Q9P016 225 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 DMRT1Q9Y5R6 373 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 NDUFB8O95169 186 aa15.5■□□□□ 0.07
ATG4D-208ENST00000588667 FAM209BQ5JX69 171 aa15.5■□□□□ 0.07
ATG4D-208ENST00000588667 ACY3Q96HD9 319 aa15.5■□□□□ 0.07
ATG4D-208ENST00000588667 RCC1LQ96I51 464 aaKnown RBP15.5■□□□□ 0.07
ATG4D-208ENST00000588667 GGTLC1Q9BX51 225 aa15.5■□□□□ 0.07
ATG4D-208ENST00000588667 AGPAT2O15120 278 aa15.5■□□□□ 0.07
ATG4D-208ENST00000588667 ELLP55199 621 aaPredicted RBP15.5■□□□□ 0.07
ATG4D-208ENST00000588667 TMEM41BQ5BJD5 291 aa15.5■□□□□ 0.07
ATG4D-208ENST00000588667 COMMD7Q86VX2 200 aa15.5■□□□□ 0.07
ATG4D-208ENST00000588667 PEF1Q9UBV8 284 aaKnown RBP15.5■□□□□ 0.07
ATG4D-208ENST00000588667 ANKRD34BA5PLL1 514 aa15.49■□□□□ 0.07
ATG4D-208ENST00000588667 ATP6V1G1O75348 118 aa15.49■□□□□ 0.07
ATG4D-208ENST00000588667 MT-CO2P00403 227 aa15.49■□□□□ 0.07
ATG4D-208ENST00000588667 FHITP49789 147 aa15.49■□□□□ 0.07
ATG4D-208ENST00000588667 FFAR4Q5NUL3 377 aa15.49■□□□□ 0.07
ATG4D-208ENST00000588667 NPIPB3Q92617 1050 aa15.48■□□□□ 0.07
ATG4D-208ENST00000588667 EEF1AKMT3Q96AZ1 226 aa15.48■□□□□ 0.07
ATG4D-208ENST00000588667 RPRMQ9NS64 109 aa15.48■□□□□ 0.07
ATG4D-208ENST00000588667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.47■□□□□ 0.07
ATG4D-208ENST00000588667 I3L2K1 104 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 ZP3P21754 424 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 RPL29P47914 159 aaKnown RBP15.47■□□□□ 0.07
ATG4D-208ENST00000588667 RND2P52198 227 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 SLURP1P55000 103 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 ACOT6Q3I5F7 207 aaPredicted RBP15.47■□□□□ 0.07
ATG4D-208ENST00000588667 ACSM6Q6P461 480 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 TMEM116Q8NCL8 245 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 MCRIP2Q9BUT9 160 aaKnown RBP15.47■□□□□ 0.07
ATG4D-208ENST00000588667 HRH4Q9H3N8 390 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 PXMP4Q9Y6I8 212 aa15.47■□□□□ 0.07
ATG4D-208ENST00000588667 TRBV12-3P01733 135 aa15.46■□□□□ 0.07
ATG4D-208ENST00000588667 IGLL1P15814 213 aa15.46■□□□□ 0.07
ATG4D-208ENST00000588667 HOXD3P31249 432 aaPredicted RBP15.46■□□□□ 0.07
ATG4D-208ENST00000588667 SAMD5Q5TGI4 173 aa15.46■□□□□ 0.07
ATG4D-208ENST00000588667 IGKV1OR2-108A0A075B7D4 117 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 TRBV7-1A0A0A6YYK4 115 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 MFSD2BA6NFX1 497 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 IGHV3-48P01763 117 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 H2AFB1P0C5Y9 115 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 M6PRP20645 277 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 OR10J1P30954 320 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 B2MP61769 119 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 THAP8Q8NA92 274 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 LYPD6BQ8NI32 183 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 VN1R17PQ8TDU5 208 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 CCDC140Q96MF4 163 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 VSIRQ9H7M9 311 aa15.46■□□□□ 0.06
ATG4D-208ENST00000588667 ZFP92A6NM28 416 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 G3V4G9 280 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 TEX46H3BTG2 121 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 RAB2AP61019 212 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 OXLD1Q5BKU9 147 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 MIC13Q5XKP0 118 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 STPG3Q8N7X2 389 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 OR10G4Q8NGN3 311 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 OR10G9Q8NGN4 311 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 OR10G7Q8NGN6 311 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 DLX4Q92988 240 aaPredicted RBP15.45■□□□□ 0.06
ATG4D-208ENST00000588667 GPR61Q9BZJ8 451 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 SLC39A9Q9NUM3 307 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 SLC45A2Q9UMX9 530 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 S4R3C0 116 aa15.45■□□□□ 0.06
ATG4D-208ENST00000588667 K7EIM0 57 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 IGHV3-23P01764 117 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 PRR20EP86478 221 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 PRR20CP86479 221 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 PRR20DP86480 221 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 PRR20BP86481 221 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 PRR20AP86496 221 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 IL34Q6ZMJ4 242 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 OR4X1Q8NH49 305 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 MARC2Q969Z3 335 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 CITED4Q96RK1 184 aa15.44■□□□□ 0.06
ATG4D-208ENST00000588667 MRPL36Q9P0J6 103 aaKnown RBP15.44■□□□□ 0.06
ATG4D-208ENST00000588667 IGHV3-21A0A0B4J1V1 117 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 BMPR1BO00238 502 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 OVOL1O14753 267 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 HBE1P02100 147 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 SELENOTP62341 195 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 RPEL1Q2QD12 228 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 CYP2G1PQ6ZSU1 146 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 ZNF502Q8TBZ5 544 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 ACTR3CQ9C0K3 210 aaPredicted RBP15.43■□□□□ 0.06
ATG4D-208ENST00000588667 CLEC19AQ6UXS0 136 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 RPP25LQ8N5L8 163 aaKnown RBP15.43■□□□□ 0.06
ATG4D-208ENST00000588667 BPIFCQ8NFQ6 507 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 SFT2D1Q8WV19 159 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 TRGV9Q99603 122 aa15.43■□□□□ 0.06
ATG4D-208ENST00000588667 C1QL4Q86Z23 238 aa15.42■□□□□ 0.06
ATG4D-208ENST00000588667 ATP6V0BQ99437 205 aa15.42■□□□□ 0.06
ATG4D-208ENST00000588667 C21orf62Q9NYP8 219 aa15.42■□□□□ 0.06
ATG4D-208ENST00000588667 IGKV1D-37A0A075B6S9 117 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 TRAV1-1A0A0B4J248 108 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 RAB19A4D1S5 217 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 SEC14L6B5MCN3 397 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 PPP5D1E7EU14 171 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms