RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 LGI3Q8N145 548 aa12.24□□□□□ -0.45
TMED1-203ENST00000588259 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
TMED1-203ENST00000588259 IL22RA2Q969J5 263 aa12.24□□□□□ -0.45
TMED1-203ENST00000588259 RNF125Q96EQ8 232 aa12.24□□□□□ -0.45
TMED1-203ENST00000588259 SCGB3A2Q96PL1 93 aa12.24□□□□□ -0.45
TMED1-203ENST00000588259 PFDN2Q9UHV9 154 aa12.24□□□□□ -0.45
TMED1-203ENST00000588259 CELA1Q9UNI1 258 aa12.24□□□□□ -0.45
TMED1-203ENST00000588259 CTDSPLO15194 276 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 BUB3O43684 328 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 NUP62P37198 522 aaPredicted RBP12.23□□□□□ -0.45
TMED1-203ENST00000588259 CCR6P51684 374 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 KLF9Q13886 244 aaPredicted RBP12.23□□□□□ -0.45
TMED1-203ENST00000588259 CSNK1G2-AS1Q8NCQ2 148 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 OR1S1Q8NH92 325 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 SLC35E1Q96K37 410 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 LINC00052Q96N35 136 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 RBKSQ9H477 322 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
TMED1-203ENST00000588259 U3KQ87 197 aa12.23□□□□□ -0.45
TMED1-203ENST00000588259 IGHV3OR16-12A0A075B7B8 117 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 DEFB131BA0A096LNP1 70 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 ANKRD20A5PA0PJZ0 165 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 H3BMM0 161 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 EMP1P54849 157 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 LYZP61626 148 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 LYZL2Q7Z4W2 148 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 COQ8AQ8NI60 647 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 PPP1R14BQ96C90 147 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 CCDC59Q9P031 241 aaKnown RBP12.22□□□□□ -0.45
TMED1-203ENST00000588259 RABL2AQ9UBK7 228 aaPredicted RBP12.22□□□□□ -0.45
TMED1-203ENST00000588259 RABL2BQ9UNT1 228 aa12.22□□□□□ -0.45
TMED1-203ENST00000588259 A0A0B4J2A0 478 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 ANXA3P12429 323 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 ALDH3B2P48448 385 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 FXYD7P58549 80 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 SRPXP78539 464 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 RNF126Q9BV68 326 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 HSPB7Q9UBY9 170 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 RSL24D1Q9UHA3 163 aaKnown RBP12.21□□□□□ -0.45
TMED1-203ENST00000588259 SHPKQ9UHJ6 478 aa12.21□□□□□ -0.45
TMED1-203ENST00000588259 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
TMED1-203ENST00000588259 FABP1P07148 127 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 HLA-DRB4P13762 266 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 ID1P41134 155 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 NKX2-1P43699 371 aaPredicted RBP12.2□□□□□ -0.46
TMED1-203ENST00000588259 DEFB1P60022 68 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 OR2F1Q13607 317 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 RAB2BQ8WUD1 216 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 SEPSECSQ9HD40 501 aaKnown RBP12.2□□□□□ -0.46
TMED1-203ENST00000588259 HLA-DRB4X5D2U9 266 aa12.2□□□□□ -0.46
TMED1-203ENST00000588259 ZNF90Q03938 601 aa12.19□□□□□ -0.46
TMED1-203ENST00000588259 GDF5OSQ5U4N7 250 aa12.19□□□□□ -0.46
TMED1-203ENST00000588259 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
TMED1-203ENST00000588259 DYNC2LI1Q8TCX1 351 aa12.19□□□□□ -0.46
TMED1-203ENST00000588259 DNAH10Q8IVF4 4471 aa12.19□□□□□ -0.46
TMED1-203ENST00000588259 VPS13DQ5THJ4 4388 aa12.19□□□□□ -0.46
TMED1-203ENST00000588259 AMBPP02760 352 aa12.18□□□□□ -0.46
TMED1-203ENST00000588259 IAPPP10997 89 aa12.18□□□□□ -0.46
TMED1-203ENST00000588259 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
TMED1-203ENST00000588259 GAMTQ14353 236 aa12.18□□□□□ -0.46
TMED1-203ENST00000588259 OR4B1Q8NGF8 309 aa12.18□□□□□ -0.46
TMED1-203ENST00000588259 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
TMED1-203ENST00000588259 WDR12Q9GZL7 423 aaKnown RBP12.18□□□□□ -0.46
TMED1-203ENST00000588259 FABP12A6NFH5 140 aa12.17□□□□□ -0.46
TMED1-203ENST00000588259 VAMP1P23763 118 aa12.17□□□□□ -0.46
TMED1-203ENST00000588259 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
TMED1-203ENST00000588259 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
TMED1-203ENST00000588259 PSMB3P49720 205 aa12.17□□□□□ -0.46
TMED1-203ENST00000588259 RAB11AP62491 216 aa12.17□□□□□ -0.46
TMED1-203ENST00000588259 GSG1LQ6UXU4 331 aa12.17□□□□□ -0.46
TMED1-203ENST00000588259 OR8I2Q8N0Y5 310 aa12.17□□□□□ -0.46
TMED1-203ENST00000588259 SCRT1Q9BWW7 348 aa12.17□□□□□ -0.46
TMED1-203ENST00000588259 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
TMED1-203ENST00000588259 SNRPGP15A8MWD9 76 aa12.16□□□□□ -0.46
TMED1-203ENST00000588259 SPART-AS1P0CW21 52 aa12.16□□□□□ -0.46
TMED1-203ENST00000588259 P0DMU3 169 aa12.16□□□□□ -0.46
TMED1-203ENST00000588259 FAM231AP0DMU4 169 aa12.16□□□□□ -0.46
TMED1-203ENST00000588259 FAM231CP0DMU5 169 aa12.16□□□□□ -0.46
TMED1-203ENST00000588259 ATP5IP56385 69 aaPredicted RBP12.16□□□□□ -0.46
TMED1-203ENST00000588259 FOXI2Q6ZQN5 318 aa12.16□□□□□ -0.46
TMED1-203ENST00000588259 SAV1Q9H4B6 383 aaPredicted RBP12.16□□□□□ -0.46
TMED1-203ENST00000588259 IGKV1D-37A0A075B6S9 117 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 TMEM189A5PLL7 270 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 HTN3P15516 51 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 TNFSF8P32971 234 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 TMBIM6P55061 237 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 C1orf194Q5T5A4 169 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 ZNF705AQ6ZN79 300 aaPredicted RBP12.15□□□□□ -0.46
TMED1-203ENST00000588259 MCFD2Q8NI22 146 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 C7orf50Q9BRJ6 194 aaKnown RBP12.15□□□□□ -0.46
TMED1-203ENST00000588259 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 RFNGQ9Y644 331 aa12.15□□□□□ -0.46
TMED1-203ENST00000588259 M0R2N4 97 aa12.14□□□□□ -0.47
TMED1-203ENST00000588259 AP3S2P59780 193 aa12.14□□□□□ -0.47
TMED1-203ENST00000588259 PYDC2Q56P42 97 aa12.14□□□□□ -0.47
TMED1-203ENST00000588259 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms