RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 TRIQKQ629K1 86 aa11.77□□□□□ -0.53
CXXC1-209ENST00000587342 TRPT1Q86TN4 253 aaKnown RBP11.77□□□□□ -0.53
CXXC1-209ENST00000587342 RNF125Q96EQ8 232 aa11.77□□□□□ -0.53
CXXC1-209ENST00000587342 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
CXXC1-209ENST00000587342 TMED3Q9Y3Q3 217 aa11.77□□□□□ -0.53
CXXC1-209ENST00000587342 EPPK1P58107 5090 aaKnown RBP11.76□□□□□ -0.53
CXXC1-209ENST00000587342 FAM90A26D6RGX4 464 aa11.76□□□□□ -0.53
CXXC1-209ENST00000587342 IL7P13232 177 aa11.76□□□□□ -0.53
CXXC1-209ENST00000587342 C4BPBP20851 252 aa11.76□□□□□ -0.53
CXXC1-209ENST00000587342 GPX4P36969 197 aaPredicted RBP11.76□□□□□ -0.53
CXXC1-209ENST00000587342 GSG1LQ6UXU4 331 aa11.76□□□□□ -0.53
CXXC1-209ENST00000587342 NARS2Q96I59 477 aaKnown RBP11.76□□□□□ -0.53
CXXC1-209ENST00000587342 CXorf65A6NEN9 183 aa11.75□□□□□ -0.53
CXXC1-209ENST00000587342 HELTA6NFD8 242 aa11.75□□□□□ -0.53
CXXC1-209ENST00000587342 ANXA7P20073 488 aaKnown RBP11.75□□□□□ -0.53
CXXC1-209ENST00000587342 ATP5IP56385 69 aaPredicted RBP11.75□□□□□ -0.53
CXXC1-209ENST00000587342 UBE2MP61081 183 aaKnown RBP11.75□□□□□ -0.53
CXXC1-209ENST00000587342 DHRS2Q13268 280 aa11.75□□□□□ -0.53
CXXC1-209ENST00000587342 GATAD1Q8WUU5 269 aa11.75□□□□□ -0.53
CXXC1-209ENST00000587342 SLC35E1Q96K37 410 aa11.75□□□□□ -0.53
CXXC1-209ENST00000587342 PIGBOS1A0A0B4J2F0 54 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 NAP1L6A6NFF2 107 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 H3BP45 60 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 WRBO00258 174 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 SYNGR2O43760 224 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 ATF4P18848 351 aaPredicted RBP11.74□□□□□ -0.53
CXXC1-209ENST00000587342 EIF2B2P49770 351 aaKnown RBP11.74□□□□□ -0.53
CXXC1-209ENST00000587342 OR2F1Q13607 317 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 THAP8Q8NA92 274 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 OR11H2Q8NH07 326 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 RARRES2Q99969 163 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
CXXC1-209ENST00000587342 PAIP2BQ9ULR5 123 aaKnown RBP11.74□□□□□ -0.53
CXXC1-209ENST00000587342 DEFB4AO15263 64 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 PLA2G10O15496 165 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 OR4E1P0C645 316 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 INPP1P49441 399 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 ACTL10Q5JWF8 245 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 STHQ8IWL8 128 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 TRGV9Q99603 122 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
CXXC1-209ENST00000587342 MED6O75586 246 aa11.72□□□□□ -0.53
CXXC1-209ENST00000587342 JTBO76095 146 aa11.72□□□□□ -0.53
CXXC1-209ENST00000587342 DEFB1P60022 68 aa11.72□□□□□ -0.53
CXXC1-209ENST00000587342 LYZP61626 148 aa11.72□□□□□ -0.53
CXXC1-209ENST00000587342 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
CXXC1-209ENST00000587342 OR8G2PQ6IF36 304 aa11.72□□□□□ -0.53
CXXC1-209ENST00000587342 TMEM182Q6ZP80 229 aaPredicted RBP11.72□□□□□ -0.53
CXXC1-209ENST00000587342 OR4D5Q8NGN0 318 aa11.72□□□□□ -0.53
CXXC1-209ENST00000587342 WDR12Q9GZL7 423 aaKnown RBP11.72□□□□□ -0.53
CXXC1-209ENST00000587342 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
CXXC1-209ENST00000587342 CCNKO75909 580 aa11.71□□□□□ -0.53
CXXC1-209ENST00000587342 RAB11AP62491 216 aa11.71□□□□□ -0.53
CXXC1-209ENST00000587342 ID3Q02535 119 aa11.71□□□□□ -0.53
CXXC1-209ENST00000587342 SPANXN5Q5MJ07 72 aa11.71□□□□□ -0.53
CXXC1-209ENST00000587342 CEMP1Q6PRD7 247 aaPredicted RBP11.71□□□□□ -0.53
CXXC1-209ENST00000587342 ACOT7LQ6ZUV0 252 aa11.71□□□□□ -0.53
CXXC1-209ENST00000587342 Q8NAQ8 132 aa11.71□□□□□ -0.53
CXXC1-209ENST00000587342 CIB3Q96Q77 187 aaPredicted RBP11.71□□□□□ -0.53
CXXC1-209ENST00000587342 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
CXXC1-209ENST00000587342 NUPR2A6NF83 97 aa11.7□□□□□ -0.54
CXXC1-209ENST00000587342 SOCS3O14543 225 aa11.7□□□□□ -0.54
CXXC1-209ENST00000587342 GATA2P23769 480 aaPredicted RBP11.7□□□□□ -0.54
CXXC1-209ENST00000587342 AP2S1P53680 142 aaPredicted RBP11.7□□□□□ -0.54
CXXC1-209ENST00000587342 NANOS2P60321 138 aaKnown RBP11.7□□□□□ -0.54
CXXC1-209ENST00000587342 CSNK1G2-AS1Q8NCQ2 148 aa11.7□□□□□ -0.54
CXXC1-209ENST00000587342 LINC00476Q8WZB0 136 aa11.7□□□□□ -0.54
CXXC1-209ENST00000587342 C17orf77Q96MU5 243 aa11.7□□□□□ -0.54
CXXC1-209ENST00000587342 C7orf50Q9BRJ6 194 aaKnown RBP11.7□□□□□ -0.54
CXXC1-209ENST00000587342 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
CXXC1-209ENST00000587342 X6R8D5 127 aa11.7□□□□□ -0.54
CXXC1-209ENST00000587342 PMS2P5A8MQ11 134 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 SSSCA1O60232 199 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 SPP1P10451 314 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 PAX9P55771 341 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 C4orf46Q504U0 113 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 GDF5OSQ5U4N7 250 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 TMEM217Q8N7C4 229 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 COQ8AQ8NI60 647 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 C20orf85Q9H1P6 137 aa11.69□□□□□ -0.54
CXXC1-209ENST00000587342 IGHV4-28A0A0C4DH34 117 aa11.68□□□□□ -0.54
CXXC1-209ENST00000587342 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
CXXC1-209ENST00000587342 RBMY1A1P0DJD3 496 aaKnown RBP11.68□□□□□ -0.54
CXXC1-209ENST00000587342 RBMY1CP0DJD4 496 aa11.68□□□□□ -0.54
CXXC1-209ENST00000587342 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
CXXC1-209ENST00000587342 RBMY1FQ15415 496 aaKnown RBP11.68□□□□□ -0.54
CXXC1-209ENST00000587342 MORN3Q6PF18 240 aaPredicted RBP11.68□□□□□ -0.54
CXXC1-209ENST00000587342 PHLDA1Q8WV24 401 aaPredicted RBP11.68□□□□□ -0.54
CXXC1-209ENST00000587342 RCL1Q9Y2P8 373 aaKnown RBP11.68□□□□□ -0.54
CXXC1-209ENST00000587342 STRAPQ9Y3F4 350 aaKnown RBP11.68□□□□□ -0.54
CXXC1-209ENST00000587342 ZNF705EA8MWA4 302 aaPredicted RBP11.67□□□□□ -0.54
CXXC1-209ENST00000587342 H3BMM0 161 aa11.67□□□□□ -0.54
CXXC1-209ENST00000587342 LYRM1O43325 122 aa11.67□□□□□ -0.54
CXXC1-209ENST00000587342 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
CXXC1-209ENST00000587342 SNRPD3P62318 126 aaKnown RBP11.67□□□□□ -0.54
CXXC1-209ENST00000587342 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
CXXC1-209ENST00000587342 MITD1Q8WV92 249 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms