RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 KLK9Q9UKQ9 250 aa15.55■□□□□ 0.08
TRIM47-204ENST00000587339 PUS1Q9Y606 427 aaKnown RBP eCLIP15.55■□□□□ 0.08
TRIM47-204ENST00000587339 TMEM250H0YL14 139 aa15.54■□□□□ 0.08
TRIM47-204ENST00000587339 IGHG2P01859 326 aa15.54■□□□□ 0.08
TRIM47-204ENST00000587339 CRIP2P52943 208 aaPredicted RBP15.54■□□□□ 0.08
TRIM47-204ENST00000587339 BLCAPP62952 87 aa15.54■□□□□ 0.08
TRIM47-204ENST00000587339 RHOGP84095 191 aa15.54■□□□□ 0.08
TRIM47-204ENST00000587339 FAM90A2PQ658T7 463 aa15.54■□□□□ 0.08
TRIM47-204ENST00000587339 TMEM167BQ9NRX6 74 aa15.54■□□□□ 0.08
TRIM47-204ENST00000587339 TRBV9A0A0B4J1U6 114 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 TRAV5A0A0B4J249 113 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 IGF1P05019 195 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 C15orf32Q32M92 178 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 OR5AU1Q8NGC0 362 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 VN1R17PQ8TDU5 208 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 ZNF503Q96F45 646 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 NIPSNAP3BQ9BS92 247 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 SLC25A2Q9BXI2 301 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 LINC00527Q9UJ94 153 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 ITPR3Q14573 2671 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 CCDC168Q8NDH2 2452 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 F8W735 103 aaPredicted RBP15.53■□□□□ 0.08
TRIM47-204ENST00000587339 NDUFS6O75380 124 aaKnown RBP15.53■□□□□ 0.08
TRIM47-204ENST00000587339 IGHV3-23P01764 117 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 LYZP61626 148 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 KIAA0141Q14154 515 aaPredicted RBP15.53■□□□□ 0.08
TRIM47-204ENST00000587339 NECAP1Q8NC96 275 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 OR51G1Q8NGK1 321 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 OR5R1Q8NH85 324 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 FAM167A-AS1Q96KT0 104 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 TXNDC17Q9BRA2 123 aa15.53■□□□□ 0.08
TRIM47-204ENST00000587339 H3BQ15 152 aa15.52■□□□□ 0.07
TRIM47-204ENST00000587339 M0R036 132 aa15.52■□□□□ 0.07
TRIM47-204ENST00000587339 TOMM40O96008 361 aa15.52■□□□□ 0.07
TRIM47-204ENST00000587339 OR10J4P0C629 311 aa15.52■□□□□ 0.07
TRIM47-204ENST00000587339 ATP5G3P48201 142 aa15.52■□□□□ 0.07
TRIM47-204ENST00000587339 C19orf54Q5BKX5 351 aa15.52■□□□□ 0.07
TRIM47-204ENST00000587339 TXN2Q99757 166 aa15.52■□□□□ 0.07
TRIM47-204ENST00000587339 TEX15Q9BXT5 2789 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 LOC105371267A0A1B0GV96 52 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 PDE6DO43924 150 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 SCGB2A1O75556 95 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 YPEL3P61236 119 aaPredicted RBP15.51■□□□□ 0.07
TRIM47-204ENST00000587339 MS4A10Q96PG2 267 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 C20orf24Q9BUV8 137 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 YTHDF2Q9Y5A9 579 aaKnown RBP15.51■□□□□ 0.07
TRIM47-204ENST00000587339 ITPR2Q14571 2701 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 FAM74A7A6NL05 159 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 FCGR2BP31994 310 aaPredicted RBP15.51■□□□□ 0.07
TRIM47-204ENST00000587339 AWAT1Q58HT5 328 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 Q6YL49 198 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 HIGD1AQ9Y241 93 aa15.51■□□□□ 0.07
TRIM47-204ENST00000587339 OR2T8A6NH00 312 aa15.5■□□□□ 0.07
TRIM47-204ENST00000587339 UBE2L3P68036 154 aaKnown RBP15.5■□□□□ 0.07
TRIM47-204ENST00000587339 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.5■□□□□ 0.07
TRIM47-204ENST00000587339 ARL2-SNX15V9GYD0 113 aa15.5■□□□□ 0.07
TRIM47-204ENST00000587339 ZNF469Q96JG9 3925 aaPredicted RBP15.5■□□□□ 0.07
TRIM47-204ENST00000587339 ZNF727A8MUV8 499 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 Q6ZS46 218 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 STXBP6Q8NFX7 210 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 ZNF502Q8TBZ5 544 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 RPUSD4Q96CM3 377 aaKnown RBP15.49■□□□□ 0.07
TRIM47-204ENST00000587339 PAXXQ9BUH6 204 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 OR51M1Q9H341 326 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 AP4M1O00189 453 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 IL4P05112 153 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 ZNF674Q2M3X9 581 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 TEX29Q8N6K0 151 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 ZNF491Q8N8L2 437 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 Q8WTZ3 238 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 RNF125Q96EQ8 232 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 TVP23CQ96ET8 276 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 NOL4LQ96MY1 436 aaPredicted RBP15.49■□□□□ 0.07
TRIM47-204ENST00000587339 SMIM7Q9BQ49 75 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 VPREB3Q9UKI3 123 aa15.49■□□□□ 0.07
TRIM47-204ENST00000587339 F6UZH7 168 aa15.48■□□□□ 0.07
TRIM47-204ENST00000587339 NUPL2O15504 423 aaKnown RBP15.48■□□□□ 0.07
TRIM47-204ENST00000587339 CTSGP08311 255 aa15.48■□□□□ 0.07
TRIM47-204ENST00000587339 PYYP10082 97 aa15.48■□□□□ 0.07
TRIM47-204ENST00000587339 PARLQ9H300 379 aa15.48■□□□□ 0.07
TRIM47-204ENST00000587339 RPS10P5Q9NQ39 176 aa15.48■□□□□ 0.07
TRIM47-204ENST00000587339 MRPL27Q9P0M9 148 aaKnown RBP15.48■□□□□ 0.07
TRIM47-204ENST00000587339 PPIFP30405 207 aaKnown RBP15.47■□□□□ 0.07
TRIM47-204ENST00000587339 FAM74A3Q4VXF1 159 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 TMEM88Q6PEY1 159 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 SLC25A39Q9BZJ4 359 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-204ENST00000587339 GAR1Q9NY12 217 aaKnown RBP15.47■□□□□ 0.07
TRIM47-204ENST00000587339 WI2-2373I1.2A0A1W2PRP0 233 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 C7orf77A4D0Y5 90 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 DNASE2O00115 360 aaPredicted RBP15.47■□□□□ 0.07
TRIM47-204ENST00000587339 OR2C1O95371 312 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 GPR183P32249 361 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 RHEBQ15382 184 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 EEF1AKMT3Q96AZ1 226 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 PRDM13Q9H4Q3 707 aa15.47■□□□□ 0.07
TRIM47-204ENST00000587339 FAM223BA6NKX1 122 aa15.46■□□□□ 0.07
TRIM47-204ENST00000587339 CLEC3BP05452 202 aa15.46■□□□□ 0.07
TRIM47-204ENST00000587339 NPPCP23582 126 aa15.46■□□□□ 0.07
TRIM47-204ENST00000587339 AKR1C3P42330 323 aa15.46■□□□□ 0.07
TRIM47-204ENST00000587339 LEMD1Q68G75 181 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms