RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PSG1P11464 419 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 SCGB2B2Q4G0G5 96 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 NMSQ5H8A3 153 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 MZT2AQ6P582 158 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 SLC24A4Q8NFF2 622 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 RNASE11Q8TAA1 199 aaKnown RBP10.3□□□□□ -0.76
SDF2-202ENST00000585428 RBPMSQ93062 196 aaKnown RBP10.3□□□□□ -0.76
SDF2-202ENST00000585428 VCX3AQ9NNX9 186 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 DKK2Q9UBU2 259 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 CACNG5Q9UF02 275 aa10.3□□□□□ -0.76
SDF2-202ENST00000585428 GSTZ1O43708 216 aaPredicted RBP10.29□□□□□ -0.76
SDF2-202ENST00000585428 RAB3DO95716 219 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 TAS2R19P59542 299 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 DEFB1P60022 68 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 RNF212Q495C1 297 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 STEAP1BQ6NZ63 245 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 ZNF709Q8N972 641 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 OR51G1Q8NGK1 321 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 KRTAP4-5Q9BYR2 181 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 WDR12Q9GZL7 423 aaKnown RBP10.29□□□□□ -0.76
SDF2-202ENST00000585428 SAV1Q9H4B6 383 aaPredicted RBP10.29□□□□□ -0.76
SDF2-202ENST00000585428 GPR132Q9UNW8 380 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 TMEM56-RWDD3S4R434 201 aa10.29□□□□□ -0.76
SDF2-202ENST00000585428 CEBPZOSA8MTT3 80 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 EMP1P54849 157 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 MEF2DQ14814 521 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 OXA1LQ15070 435 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 C15orf40Q8WUR7 153 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 NIPSNAP3BQ9BS92 247 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 NAA60Q9H7X0 242 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 EXTL2Q9UBQ6 330 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 CACFD1Q9UGQ2 172 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 RFNGQ9Y644 331 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 U3KQ87 197 aa10.28□□□□□ -0.76
SDF2-202ENST00000585428 ABCA13Q86UQ4 5058 aa10.27□□□□□ -0.76
SDF2-202ENST00000585428 IGLV2-18A0A075B6J9 118 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 CRYM-AS1A6NIL9 109 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 SOCS3O14543 225 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 TNFAIP8O95379 198 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 IGKV3-20P01619 116 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 ZNF182P17025 639 aaPredicted RBP10.27□□□□□ -0.77
SDF2-202ENST00000585428 FXYD7P58549 80 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 KLF9Q13886 244 aaPredicted RBP10.27□□□□□ -0.77
SDF2-202ENST00000585428 SURF2Q15527 256 aaPredicted RBP10.27□□□□□ -0.77
SDF2-202ENST00000585428 ZNF79Q15937 498 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 C1orf194Q5T5A4 169 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 TMEM268Q5VZI3 342 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 FOXI2Q6ZQN5 318 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 RNF125Q96EQ8 232 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 ACY3Q96HD9 319 aa10.27□□□□□ -0.77
SDF2-202ENST00000585428 IGKV1D-37A0A075B6S9 117 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 IGHV3OR16-12A0A075B7B8 117 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 GABARAPH6UMI1 98 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 GABARAPO95166 117 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 SSBP1Q04837 148 aaKnown RBP10.26□□□□□ -0.77
SDF2-202ENST00000585428 CTF1Q16619 201 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 SPATA31B1PQ5VZV4 182 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 OR8G2PQ6IF36 304 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 C1orf158Q8N1D5 194 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 AP3S1Q92572 193 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 LINC00052Q96N35 136 aa10.26□□□□□ -0.77
SDF2-202ENST00000585428 C14orf166Q9Y224 244 aaKnown RBP10.26□□□□□ -0.77
SDF2-202ENST00000585428 GPX4P36969 197 aaPredicted RBP10.25□□□□□ -0.77
SDF2-202ENST00000585428 NUP62P37198 522 aaPredicted RBP10.25□□□□□ -0.77
SDF2-202ENST00000585428 ID1P41134 155 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 PSMB3P49720 205 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 PAX9P55771 341 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 PSG9Q00887 426 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 ZNF90Q03938 601 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 GAMTQ14353 236 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 GPR107Q5VW38 600 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 FAAP20Q6NZ36 180 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 IL22RA2Q969J5 263 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 SLC35B3Q9H1N7 401 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 PFDN2Q9UHV9 154 aa10.25□□□□□ -0.77
SDF2-202ENST00000585428 DYNC1H1Q14204 4646 aaKnown RBP10.25□□□□□ -0.77
SDF2-202ENST00000585428 SULT1A3P0DMM9 295 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 SULT1A4P0DMN0 295 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 ATP5IP56385 69 aaPredicted RBP10.24□□□□□ -0.77
SDF2-202ENST00000585428 C1orf134Q5TEV5 83 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 OR4B1Q8NGF8 309 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 PBDC1Q9BVG4 233 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 NAA50Q9GZZ1 169 aaKnown RBP10.24□□□□□ -0.77
SDF2-202ENST00000585428 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
SDF2-202ENST00000585428 A0A0J9YX75 114 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 A8MTW9 85 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 SNRPGP15A8MWD9 76 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 DISC1C4P0D8 188 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 ISLRO14498 428 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 SUPT4H1P63272 117 aaKnown RBP10.23□□□□□ -0.77
SDF2-202ENST00000585428 SOHLH1Q5JUK2 328 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 FAM78BQ5VT40 261 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 GSG1LQ6UXU4 331 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 LGI3Q8N145 548 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms