RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 MED28Q9H204 178 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 TMED3Q9Y3Q3 217 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 CCNKO75909 580 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 SFT2D2O95562 160 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 HNRNPCP07910 306 aaKnown RBP eCLIP9.16□□□□□ -0.94
SS18-225ENST00000585121 RD3LP0DJH9 198 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 SLC25A6P12236 298 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 P2RY1P47900 373 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 RAB11AP62491 216 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 RPP30P78346 268 aaKnown RBP9.16□□□□□ -0.94
SS18-225ENST00000585121 DEFB135Q30KP9 77 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 LILRB2Q8N423 598 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 LRTM2Q8N967 370 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 STXBP6Q8NFX7 210 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 MAP6D1Q9H9H5 199 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 CSMD3Q7Z407 3707 aa9.16□□□□□ -0.94
SS18-225ENST00000585121 HELTA6NFD8 242 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 MPTX1A8MV57 137 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 FAM90A26D6RGX4 464 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 GPX4P36969 197 aaPredicted RBP9.15□□□□□ -0.94
SS18-225ENST00000585121 AP2S1P53680 142 aaPredicted RBP9.15□□□□□ -0.94
SS18-225ENST00000585121 PPP1R1AQ13522 171 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 C4orf46Q504U0 113 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 ZNF431Q8TF32 576 aaPredicted RBP9.15□□□□□ -0.94
SS18-225ENST00000585121 RNF183Q96D59 192 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 SLC35E1Q96K37 410 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 CIB3Q96Q77 187 aaPredicted RBP9.15□□□□□ -0.94
SS18-225ENST00000585121 PFDN2Q9UHV9 154 aa9.15□□□□□ -0.94
SS18-225ENST00000585121 PAIP2BQ9ULR5 123 aaKnown RBP9.15□□□□□ -0.94
SS18-225ENST00000585121 SSNA1O43805 119 aa9.15□□□□□ -0.95
SS18-225ENST00000585121 IL4P05112 153 aa9.15□□□□□ -0.95
SS18-225ENST00000585121 FABP1P07148 127 aa9.15□□□□□ -0.95
SS18-225ENST00000585121 HOXB5P09067 269 aa9.15□□□□□ -0.95
SS18-225ENST00000585121 DEFB131AP59861 70 aa9.15□□□□□ -0.95
SS18-225ENST00000585121 LYG2Q86SG7 212 aa9.15□□□□□ -0.95
SS18-225ENST00000585121 SEC22CQ9BRL7 303 aa9.15□□□□□ -0.95
SS18-225ENST00000585121 C9orf170A2RU37 121 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 ZFP92A6NM28 416 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 PITX3O75364 302 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 TOMM40O96008 361 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 IAPPP10997 89 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 NUP62P37198 522 aaPredicted RBP9.14□□□□□ -0.95
SS18-225ENST00000585121 DHRS2Q13268 280 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 ZNF124Q15973 351 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 STHQ8IWL8 128 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 TMEM217Q8N7C4 229 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 ST6GAL2Q96JF0 529 aa9.14□□□□□ -0.95
SS18-225ENST00000585121 LYSTQ99698 3801 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 LCE6AA0A183 80 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 JTBO76095 146 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 IFNA21P01568 189 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 FCN2Q15485 313 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 LEMD1Q68G75 181 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 C12orf45Q8N5I9 185 aaPredicted RBP9.13□□□□□ -0.95
SS18-225ENST00000585121 OR51G1Q8NGK1 321 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 COQ8AQ8NI60 647 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 GATAD1Q8WUU5 269 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 MITD1Q8WV92 249 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 U3KQE9 123 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
SS18-225ENST00000585121 TENM2Q9NT68 2774 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 A0A0J9YWU9 116 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 SYNGR2O43760 224 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 PSG1P11464 419 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 GAMTQ14353 236 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 GGNBP1Q5YKI7 109 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 C16orf54Q6UWD8 224 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 TCTE3Q8IZS6 198 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 OR11H7Q8NGC8 314 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 ASB13Q8WXK3 278 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 PBDC1Q9BVG4 233 aa9.12□□□□□ -0.95
SS18-225ENST00000585121 K7EQG2 157 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 WRBO00258 174 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
SS18-225ENST00000585121 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 USF2Q15853 346 aaPredicted RBP9.11□□□□□ -0.95
SS18-225ENST00000585121 OR8G2PQ6IF36 304 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 FAM24BQ8N5W8 94 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 GLMPQ8WWB7 406 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 RARRES2Q99969 163 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 MAGT1Q9H0U3 335 aa9.11□□□□□ -0.95
SS18-225ENST00000585121 CXorf65A6NEN9 183 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 ATF4P18848 351 aaPredicted RBP9.1□□□□□ -0.95
SS18-225ENST00000585121 CXCL3P19876 107 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
SS18-225ENST00000585121 SIGLEC15Q6ZMC9 328 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 STRAPQ9Y3F4 350 aaKnown RBP9.1□□□□□ -0.95
SS18-225ENST00000585121 RYR2Q92736 4967 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 BUB3O43684 328 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 CFDP00746 253 aaPredicted RBP9.1□□□□□ -0.95
SS18-225ENST00000585121 CD300CQ08708 224 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 PMS2P11Q13670 270 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 TMEM41BQ5BJD5 291 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 SPANXN5Q5MJ07 72 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
SS18-225ENST00000585121 TRGV9Q99603 122 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms