RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SMCO1Q147U7 214 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 NMSQ5H8A3 153 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 PRSS54Q6PEW0 395 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 STHQ8IWL8 128 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 STXBP6Q8NFX7 210 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 RARRES2Q99969 163 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 SOSTQ9BQB4 213 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 SHPKQ9UHJ6 478 aa8.15□□□□□ -1.1
CCDC47-206ENST00000584112 HELTA6NFD8 242 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 K7EQG2 157 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 RTL8CO15255 209 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 CA1P00915 261 aaPredicted RBP8.14□□□□□ -1.11
CCDC47-206ENST00000584112 IFNA10P01566 189 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 HNRNPCP07910 306 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC47-206ENST00000584112 AP2S1P53680 142 aaPredicted RBP8.14□□□□□ -1.11
CCDC47-206ENST00000584112 EWSR1Q01844 656 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC47-206ENST00000584112 TMEM41BQ5BJD5 291 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 LEMD1Q68G75 181 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 LGI3Q8N145 548 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 OR11H2Q8NH07 326 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 C11orf68Q9H3H3 251 aaKnown RBP8.14□□□□□ -1.11
CCDC47-206ENST00000584112 HSPB7Q9UBY9 170 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 U3KQ87 197 aa8.14□□□□□ -1.11
CCDC47-206ENST00000584112 DUXBA0A1W2PPF3 345 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 NXPH3O95157 252 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 S100A5P33763 92 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 ATP5IP56385 69 aaPredicted RBP8.13□□□□□ -1.11
CCDC47-206ENST00000584112 SUPT4H1P63272 117 aaKnown RBP8.13□□□□□ -1.11
CCDC47-206ENST00000584112 PYDC2Q56P42 97 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 TOMM5Q8N4H5 51 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 FAM24BQ8N5W8 94 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 DTD1Q8TEA8 209 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 DEDD2Q8WXF8 326 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 ACY3Q96HD9 319 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 MFFQ9GZY8 342 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 PRR13Q9NZ81 148 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 U3KQE9 123 aa8.13□□□□□ -1.11
CCDC47-206ENST00000584112 VPS13BQ7Z7G8 4022 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 TOMM40O96008 361 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 IL4P05112 153 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 ZNF688P0C7X2 276 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 RD3LP0DJH9 198 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 SPP1P10451 314 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 NUP62P37198 522 aaPredicted RBP8.12□□□□□ -1.11
CCDC47-206ENST00000584112 KLF9Q13886 244 aaPredicted RBP8.12□□□□□ -1.11
CCDC47-206ENST00000584112 RBMS2Q15434 407 aaKnown RBP8.12□□□□□ -1.11
CCDC47-206ENST00000584112 TMEM128Q5BJH2 165 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 MORN3Q6PF18 240 aaPredicted RBP8.12□□□□□ -1.11
CCDC47-206ENST00000584112 C16orf54Q6UWD8 224 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 LYZL2Q7Z4W2 148 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 OR1S1Q8NH92 325 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 DCANP1Q8TF63 244 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
CCDC47-206ENST00000584112 TMEM170AQ8WVE7 144 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 GLMPQ8WWB7 406 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 NPIPB3Q92617 1050 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 RBKSQ9H477 322 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 PFDN2Q9UHV9 154 aa8.12□□□□□ -1.11
CCDC47-206ENST00000584112 CCDC160A6NGH7 325 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 IFNA4P05014 189 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 DHRS2Q13268 280 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 TMED4Q7Z7H5 227 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 TRPT1Q86TN4 253 aaKnown RBP8.11□□□□□ -1.11
CCDC47-206ENST00000584112 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 C11orf45Q8TAV5 145 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 TRIM63Q969Q1 353 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 SLC35E1Q96K37 410 aa8.11□□□□□ -1.11
CCDC47-206ENST00000584112 SLC25A21Q9BQT8 299 aaPredicted RBP8.11□□□□□ -1.11
CCDC47-206ENST00000584112 SEPSECSQ9HD40 501 aaKnown RBP8.11□□□□□ -1.11
CCDC47-206ENST00000584112 FABP1P07148 127 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 PSG1P11464 419 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 VAMP1P23763 118 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 GPX4P36969 197 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-206ENST00000584112 SNRPD3P62318 126 aaKnown RBP8.1□□□□□ -1.11
CCDC47-206ENST00000584112 RAB11AP62491 216 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
CCDC47-206ENST00000584112 SIGLEC15Q6ZMC9 328 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 LRTM2Q8N967 370 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 OR51G1Q8NGK1 321 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 NRN1Q9NPD7 142 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 V9GYH0 126 aa8.1□□□□□ -1.11
CCDC47-206ENST00000584112 ZFP92A6NM28 416 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 FAM90A26D6RGX4 464 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 BUB3O43684 328 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 MED6O75586 246 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 SLC25A6P12236 298 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 PSMG4Q5JS54 123 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 ACTL10Q5JWF8 245 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 OR8G2PQ6IF36 304 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 RNF125Q96EQ8 232 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 TMED3Q9Y3Q3 217 aa8.09□□□□□ -1.11
CCDC47-206ENST00000584112 KNCNA6PVL3 124 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 PITX3O75364 302 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 MIFP14174 115 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
CCDC47-206ENST00000584112 NUTF2P61970 127 aaKnown RBP8.08□□□□□ -1.12
CCDC47-206ENST00000584112 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
CCDC47-206ENST00000584112 GAMTQ14353 236 aa8.08□□□□□ -1.12
CCDC47-206ENST00000584112 ZNF79Q15937 498 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms