RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 C9orf170A2RU37 121 aa15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 CXorf65A6NEN9 183 aa15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 ZFP92A6NM28 416 aa15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 CA1P00915 261 aaPredicted RBP15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 UBE2MP61081 183 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 ZNF90Q03938 601 aa15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 DHRS2Q13268 280 aa15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 PLECQ15149 4684 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 STHQ8IWL8 128 aa15.72■□□□□ 0.11
PPP4R1-228ENST00000584074 KNCNA6PVL3 124 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 WRBO00258 174 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 BUB3O43684 328 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 SYNGR2O43760 224 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 MED6O75586 246 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 RAB11AP62491 216 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 GATAD1Q8WUU5 269 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 RNF125Q96EQ8 232 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 RARRES2Q99969 163 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 PBDC1Q9BVG4 233 aa15.71■□□□□ 0.11
PPP4R1-228ENST00000584074 HYDINQ4G0P3 5121 aa15.7■□□□□ 0.1
PPP4R1-228ENST00000584074 ADAP1O75689 374 aa15.7■□□□□ 0.1
PPP4R1-228ENST00000584074 BTCP35070 178 aa15.7■□□□□ 0.1
PPP4R1-228ENST00000584074 AP2S1P53680 142 aaPredicted RBP15.7■□□□□ 0.1
PPP4R1-228ENST00000584074 JTBO76095 146 aa15.69■□□□□ 0.1
PPP4R1-228ENST00000584074 IL7P13232 177 aa15.69■□□□□ 0.1
PPP4R1-228ENST00000584074 TRPT1Q86TN4 253 aaKnown RBP15.69■□□□□ 0.1
PPP4R1-228ENST00000584074 OR11H2Q8NH07 326 aa15.69■□□□□ 0.1
PPP4R1-228ENST00000584074 CIB3Q96Q77 187 aaPredicted RBP15.69■□□□□ 0.1
PPP4R1-228ENST00000584074 OR4E1P0C645 316 aa15.68■□□□□ 0.1
PPP4R1-228ENST00000584074 ATF4P18848 351 aaPredicted RBP15.68■□□□□ 0.1
PPP4R1-228ENST00000584074 ANXA7P20073 488 aaKnown RBP15.68■□□□□ 0.1
PPP4R1-228ENST00000584074 OR2F1Q13607 317 aa15.68■□□□□ 0.1
PPP4R1-228ENST00000584074 PSMG4Q5JS54 123 aa15.68■□□□□ 0.1
PPP4R1-228ENST00000584074 SIGLEC15Q6ZMC9 328 aa15.68■□□□□ 0.1
PPP4R1-228ENST00000584074 IGKV1OR2-108A0A075B7D4 117 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 CENPXA8MT69 81 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 GIG44P09565 113 aaPredicted RBP15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 RPP30P78346 268 aaKnown RBP15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 ACTL10Q5JWF8 245 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 SPANXN5Q5MJ07 72 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 TMEM217Q8N7C4 229 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 COQ8AQ8NI60 647 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 NRN1Q9NPD7 142 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 NDUFA13Q9P0J0 144 aa15.67■□□□□ 0.1
PPP4R1-228ENST00000584074 ALMS1Q8TCU4 4167 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 PRSS46E5RG02 174 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 H3BP45 60 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 FABP1P07148 127 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 LYZP61626 148 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 ID3Q02535 119 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 C4orf46Q504U0 113 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 OR8G2PQ6IF36 304 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 THAP8Q8NA92 274 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 RAB40CQ96S21 281 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 TRGV9Q99603 122 aa15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 C7orf50Q9BRJ6 194 aaKnown RBP15.66■□□□□ 0.1
PPP4R1-228ENST00000584074 SNRPGP15A8MWD9 76 aa15.65■□□□□ 0.1
PPP4R1-228ENST00000584074 POLR2GP62487 172 aaKnown RBP eCLIP15.65■□□□□ 0.1
PPP4R1-228ENST00000584074 NUPR2A6NF83 97 aa15.64■□□□□ 0.09
PPP4R1-228ENST00000584074 C4BPBP20851 252 aa15.64■□□□□ 0.09
PPP4R1-228ENST00000584074 NUP62P37198 522 aaPredicted RBP15.64■□□□□ 0.09
PPP4R1-228ENST00000584074 MORN3Q6PF18 240 aaPredicted RBP15.64■□□□□ 0.09
PPP4R1-228ENST00000584074 CEMP1Q6PRD7 247 aaPredicted RBP15.64■□□□□ 0.09
PPP4R1-228ENST00000584074 PFDN2Q9UHV9 154 aa15.64■□□□□ 0.09
PPP4R1-228ENST00000584074 STRAPQ9Y3F4 350 aaKnown RBP15.64■□□□□ 0.09
PPP4R1-228ENST00000584074 DEFB4AO15263 64 aa15.63■□□□□ 0.09
PPP4R1-228ENST00000584074 PLA2G10O15496 165 aa15.63■□□□□ 0.09
PPP4R1-228ENST00000584074 IFNA21P01568 189 aa15.63■□□□□ 0.09
PPP4R1-228ENST00000584074 SPP1P10451 314 aa15.63■□□□□ 0.09
PPP4R1-228ENST00000584074 NKX2-1P43699 371 aaPredicted RBP15.63■□□□□ 0.09
PPP4R1-228ENST00000584074 SNRPD3P62318 126 aaKnown RBP15.63■□□□□ 0.09
PPP4R1-228ENST00000584074 OR4D5Q8NGN0 318 aa15.63■□□□□ 0.09
PPP4R1-228ENST00000584074 PPP1R14BQ96C90 147 aa15.62■□□□□ 0.09
PPP4R1-228ENST00000584074 WDR12Q9GZL7 423 aaKnown RBP15.62■□□□□ 0.09
PPP4R1-228ENST00000584074 C11orf68Q9H3H3 251 aaKnown RBP15.62■□□□□ 0.09
PPP4R1-228ENST00000584074 SEPSECSQ9HD40 501 aaKnown RBP15.62■□□□□ 0.09
PPP4R1-228ENST00000584074 SSSCA1O60232 199 aa15.61■□□□□ 0.09
PPP4R1-228ENST00000584074 C1orf194Q5T5A4 169 aa15.61■□□□□ 0.09
PPP4R1-228ENST00000584074 GSG1LQ6UXU4 331 aa15.61■□□□□ 0.09
PPP4R1-228ENST00000584074 ACOT7LQ6ZUV0 252 aa15.61■□□□□ 0.09
PPP4R1-228ENST00000584074 CLEC5AQ9NY25 188 aa15.61■□□□□ 0.09
PPP4R1-228ENST00000584074 PSENENQ9NZ42 101 aa15.61■□□□□ 0.09
PPP4R1-228ENST00000584074 GATA2P23769 480 aaPredicted RBP15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 NANOS2P60321 138 aaKnown RBP15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 AKR1C1Q04828 323 aa15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 TMEM41BQ5BJD5 291 aa15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 TMEM182Q6ZP80 229 aaPredicted RBP15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 PHLDA1Q8WV24 401 aaPredicted RBP15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 C20orf85Q9H1P6 137 aa15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 FBXL17Q9UF56 701 aa15.6■□□□□ 0.09
PPP4R1-228ENST00000584074 LYRM1O43325 122 aa15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 PAX9P55771 341 aa15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 DEFB1P60022 68 aa15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 IAH1Q2TAA2 248 aaPredicted RBP15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 Q8NAQ8 132 aa15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 C11orf45Q8TAV5 145 aa15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 MITD1Q8WV92 249 aa15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 SMIM8Q96KF7 97 aa15.59■□□□□ 0.09
PPP4R1-228ENST00000584074 AGRNO00468 2067 aa15.58■□□□□ 0.09
PPP4R1-228ENST00000584074 H3BMM0 161 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms