RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 IGHV3OR16-8A0A075B7F1 116 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 NUP62P37198 522 aaPredicted RBP12.11□□□□□ -0.47
CCDC57-213ENST00000581625 NHLH2Q02577 135 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 ZNF90Q03938 601 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 BEAN1Q3B7T3 259 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 LCN12Q6JVE5 192 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 CHAC2Q8WUX2 184 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 RNF125Q96EQ8 232 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 NARS2Q96I59 477 aaKnown RBP12.11□□□□□ -0.47
CCDC57-213ENST00000581625 METTL26Q96S19 204 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
CCDC57-213ENST00000581625 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
CCDC57-213ENST00000581625 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 UBE2L5PA0A1B0GUS4 154 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 MPDU1O75352 247 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 NPPCP23582 126 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 RAB31Q13636 194 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 ADAMTSL5Q6ZMM2 481 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 CYP2G1PQ6ZSU1 146 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 BPIFCQ8NFQ6 507 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 AQP10Q96PS8 301 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
CCDC57-213ENST00000581625 WI2-2373I1.2A0A1W2PRP0 233 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 ZNF207O43670 478 aaKnown RBP12.09□□□□□ -0.47
CCDC57-213ENST00000581625 DFFBO76075 338 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 EDN2P20800 178 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 CRYBB3P26998 211 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 ATP5SQ99766 215 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 SMPXQ9UHP9 88 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 RABAC1Q9UI14 185 aa12.09□□□□□ -0.47
CCDC57-213ENST00000581625 FXYD6-FXYD2A0A087WZ82 144 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 A0A1W2PS18 150 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 AGPAT2O15120 278 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 CD5P06127 495 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 HNRNPCP07910 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC57-213ENST00000581625 S100A7P31151 101 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 LYZP61626 148 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 OR2F1Q13607 317 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 CLINT1Q14677 625 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 USF2Q15853 346 aaPredicted RBP12.08□□□□□ -0.48
CCDC57-213ENST00000581625 DEFB114Q30KQ6 69 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 Q5BKY6 102 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 INO80EQ8NBZ0 244 aaPredicted RBP12.08□□□□□ -0.48
CCDC57-213ENST00000581625 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 MLXQ9UH92 298 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 SLC45A2Q9UMX9 530 aa12.08□□□□□ -0.48
CCDC57-213ENST00000581625 TRAV25A0A0B4J276 109 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 G3V3Q6 166 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 CHEK1O14757 476 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 LINC00869P0C866 280 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 CAMLGP49069 296 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 EIF2B2P49770 351 aaKnown RBP12.07□□□□□ -0.48
CCDC57-213ENST00000581625 CD300EQ496F6 205 aaPredicted RBP12.07□□□□□ -0.48
CCDC57-213ENST00000581625 GRAMD2BQ96HH9 432 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 MGST2Q99735 147 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 RHPN1-AS1Q9BWJ2 59 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 VSIRQ9H7M9 311 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 KCNIP2Q9NS61 270 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 TNFSF18Q9UNG2 199 aa12.07□□□□□ -0.48
CCDC57-213ENST00000581625 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
CCDC57-213ENST00000581625 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
CCDC57-213ENST00000581625 FGF7P21781 194 aa12.06□□□□□ -0.48
CCDC57-213ENST00000581625 PLP1P60201 277 aa12.06□□□□□ -0.48
CCDC57-213ENST00000581625 PXDC1Q5TGL8 231 aa12.06□□□□□ -0.48
CCDC57-213ENST00000581625 LAMTOR1Q6IAA8 161 aa12.06□□□□□ -0.48
CCDC57-213ENST00000581625 S100A7AQ86SG5 101 aa12.06□□□□□ -0.48
CCDC57-213ENST00000581625 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
CCDC57-213ENST00000581625 hCG_2014768A0A024R1R8 64 aa12.05□□□□□ -0.48
CCDC57-213ENST00000581625 ZNF266Q14584 549 aa12.05□□□□□ -0.48
CCDC57-213ENST00000581625 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
CCDC57-213ENST00000581625 TMEM61Q8N0U2 210 aa12.05□□□□□ -0.48
CCDC57-213ENST00000581625 ST8SIA2Q92186 375 aa12.05□□□□□ -0.48
CCDC57-213ENST00000581625 NPCDR1Q9BY65 106 aa12.05□□□□□ -0.48
CCDC57-213ENST00000581625 PARD6GQ9BYG4 376 aaPredicted RBP12.05□□□□□ -0.48
CCDC57-213ENST00000581625 WDR61Q9GZS3 305 aaKnown RBP12.05□□□□□ -0.48
CCDC57-213ENST00000581625 U3KQE9 123 aa12.05□□□□□ -0.48
CCDC57-213ENST00000581625 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 RNF222A6NCQ9 220 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 IFNA5P01569 189 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 GATA2P23769 480 aaPredicted RBP12.04□□□□□ -0.48
CCDC57-213ENST00000581625 RPL29P47914 159 aaKnown RBP12.04□□□□□ -0.48
CCDC57-213ENST00000581625 OPCMLQ14982 345 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 TCTE3Q8IZS6 198 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 RNF2Q99496 336 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 SPAG8Q99932 426 aaPredicted RBP12.04□□□□□ -0.48
CCDC57-213ENST00000581625 SMIM3Q9BZL3 60 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 FBXL17Q9UF56 701 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
CCDC57-213ENST00000581625 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
CCDC57-213ENST00000581625 IGHV3-74A0A0B4J1X5 117 aa12.03□□□□□ -0.48
CCDC57-213ENST00000581625 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
CCDC57-213ENST00000581625 TSPAN4O14817 238 aa12.03□□□□□ -0.48
CCDC57-213ENST00000581625 ARPC5O15511 151 aa12.03□□□□□ -0.48
CCDC57-213ENST00000581625 BUB3O43684 328 aa12.03□□□□□ -0.48
CCDC57-213ENST00000581625 APOHP02749 345 aaPredicted RBP12.03□□□□□ -0.48
CCDC57-213ENST00000581625 GP9P14770 177 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms