RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 EBLN2Q6P2I7 272 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 SSX7Q7RTT5 188 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 LYPD1Q8N2G4 141 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 NRG4Q8WWG1 115 aa8.89□□□□□ -0.99
SS18-219ENST00000581570 FAT1Q14517 4588 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 F6UB75 175 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 TOMM40O96008 361 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 PRM2P04554 102 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 PRSS3P35030 304 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 PAX9P55771 341 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 DLK1P80370 383 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 TMEM69Q5SWH9 247 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 OR51G1Q8NGK1 321 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 RNF141Q8WVD5 230 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 NPIPB3Q92617 1050 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 IGF2BP2-AS1Q96M15 143 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 CNBD2Q96M20 576 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 KRTAP1-5Q9BYS1 174 aa8.88□□□□□ -0.99
SS18-219ENST00000581570 A0A0J9YX75 114 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 ZNF705GA8MUZ8 300 aaPredicted RBP8.87□□□□□ -0.99
SS18-219ENST00000581570 ATP5G1P05496 136 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 PSG1P11464 419 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 NUP62P37198 522 aaPredicted RBP8.87□□□□□ -0.99
SS18-219ENST00000581570 ATP5G3P48201 142 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 SPCS3P61009 180 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 Q5VSD8 79 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 RNASEH2CQ8TDP1 164 aaKnown RBP8.87□□□□□ -0.99
SS18-219ENST00000581570 FRZBQ92765 325 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 TP53RKQ96S44 253 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
SS18-219ENST00000581570 A0A0G2JRQ6 117 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 LOC100506127A0A0U1RQW1 187 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 SOCS3O14543 225 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 TMEM127O75204 238 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 NXPH3O95157 252 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 PGAM2P15259 253 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 XGP55808 180 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 RND3P61587 244 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 FCN2Q15485 313 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 TRIM16LQ309B1 348 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 C2orf83Q53S99 150 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 ETFRF1Q6IPR1 90 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 SPARTQ8N0X7 666 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 RRNAD1Q96FB5 475 aaKnown RBP8.86□□□□□ -0.99
SS18-219ENST00000581570 ACY3Q96HD9 319 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 ABHD1Q96SE0 405 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 PBDC1Q9BVG4 233 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 Q9H3A6 140 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 HEYLQ9NQ87 328 aaPredicted RBP8.86□□□□□ -0.99
SS18-219ENST00000581570 PTTG2Q9NZH5 202 aa8.86□□□□□ -0.99
SS18-219ENST00000581570 C3orf85A0A1B0GTC6 90 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 CBY3A6NI87 242 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 ISLRO14498 428 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 PI3P19957 117 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 PIGPP57054 158 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 GABARAPL2P60520 117 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 UBE2NLQ5JXB2 153 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 OR4C16Q8NGL9 310 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 RNASE11Q8TAA1 199 aaKnown RBP8.85□□□□□ -0.99
SS18-219ENST00000581570 GPX8Q8TED1 209 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 FCGR1BQ92637 280 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 GPR146Q96CH1 333 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 RNF125Q96EQ8 232 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 RPRMQ9NS64 109 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 DOK5Q9P104 306 aa8.85□□□□□ -0.99
SS18-219ENST00000581570 A0A1W2PPQ1 181 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 A8MTW9 85 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 TSPOP30536 169 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 RCVRNP35243 200 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 B2MP61769 119 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 SP6Q3SY56 376 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 OR8G2PQ6IF36 304 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 AMTNQ6UX39 209 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 SLC24A4Q8NFF2 622 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 OR52E5Q8NH55 327 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 ZNF486Q96H40 463 aaPredicted RBP8.84□□□□□ -0.99
SS18-219ENST00000581570 C18orf15Q96N68 181 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 UHRF2Q96PU4 802 aa8.84□□□□□ -0.99
SS18-219ENST00000581570 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.84□□□□□ -0.99
SS18-219ENST00000581570 VPS13BQ7Z7G8 4022 aa8.83□□□□□ -1
SS18-219ENST00000581570 INSP01308 110 aa8.83□□□□□ -1
SS18-219ENST00000581570 AZU1P20160 251 aa8.83□□□□□ -1
SS18-219ENST00000581570 SUPT4H1P63272 117 aaKnown RBP8.83□□□□□ -1
SS18-219ENST00000581570 C1orf194Q5T5A4 169 aa8.83□□□□□ -1
SS18-219ENST00000581570 SAMD12Q8N8I0 201 aa8.83□□□□□ -1
SS18-219ENST00000581570 TMEM170AQ8WVE7 144 aa8.83□□□□□ -1
SS18-219ENST00000581570 C20orf173Q96LM9 149 aa8.83□□□□□ -1
SS18-219ENST00000581570 ZNF586Q9NXT0 402 aa8.83□□□□□ -1
SS18-219ENST00000581570 MYCBP2O75592 4640 aa8.82□□□□□ -1
SS18-219ENST00000581570 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
SS18-219ENST00000581570 CEBPZOSA8MTT3 80 aa8.82□□□□□ -1
SS18-219ENST00000581570 M0R2Z0 102 aa8.82□□□□□ -1
SS18-219ENST00000581570 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
SS18-219ENST00000581570 ELK1P19419 428 aa8.82□□□□□ -1
SS18-219ENST00000581570 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
SS18-219ENST00000581570 SPINK13Q1W4C9 94 aa8.82□□□□□ -1
SS18-219ENST00000581570 AARDQ4LEZ3 155 aa8.82□□□□□ -1
SS18-219ENST00000581570 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
SS18-219ENST00000581570 NOXA1Q86UR1 476 aa8.82□□□□□ -1
SS18-219ENST00000581570 CROCCP3Q8IVE0 287 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms