RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 SLC39A9Q9NUM3 307 aa4.88□□□□□ -1.63
PTPRM-213ENST00000580949 C1RLQ9NZP8 487 aa4.88□□□□□ -1.63
PTPRM-213ENST00000580949 ITPR3Q14573 2671 aa4.88□□□□□ -1.63
PTPRM-213ENST00000580949 VPS13CQ709C8 3753 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 IGLV11-55A0A075B6I3 123 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 LOC102723971A0A1B0GUV8 181 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 PSMB11A5LHX3 300 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 MAP1LC3B2A6NCE7 125 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 BTBD17A6NE02 478 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 RBFOX3A6NFN3 312 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 NPIPB5A8MRT5 1133 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 G3V318 75 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 H3BUX3 64 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 ATP6V0E1O15342 81 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 NDUFB8O95169 186 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 IGHV4-59P01825 116 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 MBP02144 154 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 FBP1P09467 338 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 ADCYAP1P18509 176 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 ZP3P21754 424 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 B2MP61769 119 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 KRTAP1-1Q07627 177 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 RAB31Q13636 194 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 HAGHQ16775 308 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 KLK9Q2XQG4 91 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 ACOT6Q3I5F7 207 aaPredicted RBP4.87□□□□□ -1.63
PTPRM-213ENST00000580949 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
PTPRM-213ENST00000580949 C10orf91Q5T1B1 145 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 CYP2G1PQ6ZSU1 146 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 TMEM116Q8NCL8 245 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 GATAD1Q8WUU5 269 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 FOXC2Q99958 501 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 ACTR3CQ9C0K3 210 aaPredicted RBP4.87□□□□□ -1.63
PTPRM-213ENST00000580949 MAP1LC3BQ9GZQ8 125 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 SLC25A22Q9H936 323 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 SEPSECSQ9HD40 501 aaKnown RBP4.87□□□□□ -1.63
PTPRM-213ENST00000580949 TREM1Q9NP99 234 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 KLK9Q9UKQ9 250 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 MOB4Q9Y3A3 225 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 S4R3C0 116 aa4.87□□□□□ -1.63
PTPRM-213ENST00000580949 CELSR1Q9NYQ6 3014 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 NOTCH2Q04721 2471 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 CR1P17927 2039 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 CTXND1A0A1B0GTU2 59 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 TCRBV4S1A1TA0A5B7 111 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 KRBOX1C9JBD0 128 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 CYB5BO43169 146 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 IGKV1-17P01599 117 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 HBE1P02100 147 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 IGLC1P0CG04 106 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 BPIFB3P59826 476 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 BLCAPP62952 87 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 DEFA5Q01523 94 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 FOXI1Q12951 378 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 ZNF506Q5JVG8 444 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 ETFRF1Q6IPR1 90 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 ATRAIDQ6UW56 229 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 PATE2Q6UY27 113 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 C9orf139Q6ZV77 190 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 MIR17HGQ75NE6 70 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 CCDC28AQ8IWP9 274 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 SGMS2Q8NHU3 365 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 FAM110DQ8TAY7 271 aaPredicted RBP4.86□□□□□ -1.63
PTPRM-213ENST00000580949 NANPQ8TBE9 248 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 TMEM37Q8WXS4 190 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 NARS2Q96I59 477 aaKnown RBP4.86□□□□□ -1.63
PTPRM-213ENST00000580949 ZNF48Q96MX3 618 aaPredicted RBP4.86□□□□□ -1.63
PTPRM-213ENST00000580949 TRGV9Q99603 122 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 KRTAP4-5Q9BYR2 181 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 EIF5A2Q9GZV4 153 aaKnown RBP4.86□□□□□ -1.63
PTPRM-213ENST00000580949 TNFRSF19Q9NS68 423 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 TMEM160Q9NX00 188 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 GNG13Q9P2W3 67 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 SVEP1Q4LDE5 3571 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 TEX15Q9BXT5 2789 aa4.86□□□□□ -1.63
PTPRM-213ENST00000580949 TRAV5A0A0B4J249 113 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 ZFP92A6NM28 416 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 CORTO00230 105 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 TRIAP1O43715 76 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 SOX15O60248 233 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 SCO1O75880 301 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 OR2J3O76001 311 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 SRP19P09132 144 aaKnown RBP4.85□□□□□ -1.63
PTPRM-213ENST00000580949 SFTA3P0C7M3 94 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 IER3P46695 156 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 CDC34P49427 236 aaPredicted RBP4.85□□□□□ -1.63
PTPRM-213ENST00000580949 CRIP2P52943 208 aaPredicted RBP4.85□□□□□ -1.63
PTPRM-213ENST00000580949 PEA15Q15121 130 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 GUCA2BQ16661 112 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 TIGITQ495A1 244 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 AKIRIN2Q53H80 203 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 MORN5Q5VZ52 161 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 UNQ5815/PRO19632Q6UWF5 114 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 OR1L6Q8NGR2 347 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 OR4X1Q8NH49 305 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 RXFP4Q8TDU9 374 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 ZNF414Q96IQ9 312 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 FAM167A-AS1Q96KT0 104 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 PRDM13Q9H4Q3 707 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 KCNIP2Q9NS61 270 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms