RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 C12orf77C9JDV5 145 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 NPFFO15130 113 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 CHST1O43916 411 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 CXCL1P09341 107 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 CD28P10747 220 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 HIST1H1BP16401 226 aaKnown RBP2.68□□□□□ -1.98
CDH19-204ENST00000579658 CD24P25063 80 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 SAA4P35542 130 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 RPS10P46783 165 aaKnown RBP2.68□□□□□ -1.98
CDH19-204ENST00000579658 HERV-K104P61576 105 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 HLA-DRB3P79483 266 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 MEF2CQ06413 473 aaPredicted RBP2.68□□□□□ -1.98
CDH19-204ENST00000579658 RNF151Q2KHN1 245 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 CD300EQ496F6 205 aaPredicted RBP2.68□□□□□ -1.98
CDH19-204ENST00000579658 ZNF818PQ6ZRF7 136 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 ZNF695Q8IW36 515 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 H1FOOQ8IZA3 346 aaPredicted RBP2.68□□□□□ -1.98
CDH19-204ENST00000579658 CYB561D1Q8N8Q1 229 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 OR52L2PQ8NGH6 319 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 OR10V1Q8NGI7 309 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 MBD3L1Q8WWY6 194 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 P2RX4Q99571 388 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 NIPSNAP3BQ9BS92 247 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 MEGF9Q9H1U4 602 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 PITPNC1Q9UKF7 332 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 TRAPPC2LQ9UL33 140 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 HILPDAQ9Y5L2 63 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 RFNGQ9Y644 331 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 WSB1Q9Y6I7 421 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 HYDINQ4G0P3 5121 aa2.68□□□□□ -1.98
CDH19-204ENST00000579658 DNAH7Q8WXX0 4024 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 TRBV24-1A0A075B6N3 115 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 IGHV2-26A0A0B4J1V2 119 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 IGKV1-6A0A0C4DH72 117 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 KBTBD11-OT1A0A1B0GTJ5 212 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 TMEM30CPA0ZSE6 113 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ZNF727A8MUV8 499 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ODF3BA8MYP8 253 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 H0Y980 276 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 K7EN84 100 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 PGLYRP1O75594 196 aaPredicted RBP2.67□□□□□ -1.98
CDH19-204ENST00000579658 DFFBO76075 338 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 YIF1AO95070 293 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 HBZP02008 142 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 SCTP09683 121 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 F2RP25116 425 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 MYCNOSP40205 109 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 DYNLT3P51808 116 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 UBE2E1P51965 193 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 FGF8P55075 233 aaPredicted RBP2.67□□□□□ -1.98
CDH19-204ENST00000579658 SERF2P84101 59 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 KIR2DS1Q14954 304 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 OR2B11Q5JQS5 317 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ZNF880Q6PDB4 577 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 LINC00596Q86U02 117 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 CMTM1Q8IZ96 169 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 HIST3H2BBQ8N257 126 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 GAPTQ8N292 157 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ABHD12Q8N2K0 398 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 OR4X2Q8NGF9 303 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 OR4P4Q8NGL7 312 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 OR1L6Q8NGR2 347 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 PIFOQ8TCI5 191 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ATP5SQ99766 215 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 PSMG3Q9BT73 122 aaPredicted RBP2.67□□□□□ -1.98
CDH19-204ENST00000579658 TMEM133Q9H2Q1 129 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 IDI2-AS1Q9NZ38 188 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 NAGKQ9UJ70 344 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 PSG11Q9UQ72 335 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 NOTCH3Q9UM47 2321 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 IGKV1D-13A0A0B4J2D9 117 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ITGB1BP1O14713 200 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 SSSCA1O60232 199 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 CST7O76096 145 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 IGLV1-47P01700 117 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 TRGC2P03986 189 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 IGKV1-13P0DP09 117 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 GZMHP20718 246 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 S100A2P29034 98 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 PPIFP30405 207 aaKnown RBP2.67□□□□□ -1.98
CDH19-204ENST00000579658 GPX4P36969 197 aaPredicted RBP2.67□□□□□ -1.98
CDH19-204ENST00000579658 NDUFA6P56556 154 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 LINC00205P59089 165 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 SPCS3P61009 180 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 RPL23AP62750 156 aaKnown RBP2.67□□□□□ -1.98
CDH19-204ENST00000579658 SSX2Q16385 188 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 LY6EQ16553 131 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 CT45A1Q5HYN5 189 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 AKR1C8PQ5T2L2 129 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 C9orf66Q5T8R8 295 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ZNF343Q6P1L6 599 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 C16orf82Q7Z2V1 217 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 CT45A3Q8NHU0 189 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 LSM10Q969L4 123 aaKnown RBP2.67□□□□□ -1.98
CDH19-204ENST00000579658 LYSTQ99698 3801 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 PYGO2Q9BRQ0 406 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 ZNF702PQ9H963 129 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 SDF2L1Q9HCN8 221 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 SERTAD4Q9NUC0 356 aa2.67□□□□□ -1.98
CDH19-204ENST00000579658 MBNL3Q9NUK0 354 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms