RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 MED12Q93074 2177 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 TMEM238LA0A1B0GVL6 79 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 A6NJY4 79 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 TDGF1P3P51864 188 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 BIVMQ86UB2 503 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 LDLRAD4O15165 306 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 OR10AG1Q8NH19 301 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 PARLQ9H300 379 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 FANCMQ8IYD8 2048 aa8.31□□□□□ -1.08
MSI2-209ENST00000579483 F8VVB4 439 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 F8VWA3 439 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 LGALS3P17931 250 aaKnown RBP8.3□□□□□ -1.08
MSI2-209ENST00000579483 SYNJ2BPP57105 145 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 Q6ZR03 302 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 C10orf105Q8TEF2 133 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 DOPEY2Q9Y3R5 2298 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 CXorf65A6NEN9 183 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 NDUFB8O95169 186 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 C10orf55Q5SWW7 151 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 RPP21Q9H633 154 aaKnown RBP8.3□□□□□ -1.08
MSI2-209ENST00000579483 COX6CP09669 75 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
MSI2-209ENST00000579483 ZNF506Q5JVG8 444 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 OR10W1Q8NGF6 305 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 A0A087WX48 190 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 FNDC10F2Z333 226 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
MSI2-209ENST00000579483 TOMM40O96008 361 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 ZNF688P0C7X2 276 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 PSG1P11464 419 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 GLMPQ8WWB7 406 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 EPDR1Q9UM22 224 aa8.3□□□□□ -1.08
MSI2-209ENST00000579483 F2Z2F3 143 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 IGHV2-70P01814 119 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 RPL35AP18077 110 aaKnown RBP8.29□□□□□ -1.08
MSI2-209ENST00000579483 LYPD1Q8N2G4 141 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 SFRP2Q96HF1 295 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 GATA2P23769 480 aaPredicted RBP8.29□□□□□ -1.08
MSI2-209ENST00000579483 PKIAP61925 76 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 RNF138Q8WVD3 245 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 PSG8Q9UQ74 426 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 CUL9Q8IWT3 2517 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 LINC00862A6NCI5 91 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 OVOL3O00110 214 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 PLXNA2O75051 1894 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 MALP21145 153 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 ATP6V0E1O15342 81 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
MSI2-209ENST00000579483 LHFPL1Q86WI0 220 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 C8orf31Q8N9H6 132 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 TBX15Q96SF7 602 aa8.29□□□□□ -1.08
MSI2-209ENST00000579483 PHOX2AO14813 284 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 PCNX1Q96RV3 2341 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 ATP5LO75964 103 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 OR4C5Q8NGB2 326 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 RCHY1Q96PM5 261 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.28□□□□□ -1.08
MSI2-209ENST00000579483 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 FOSL1P15407 271 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 GRNP28799 593 aaKnown RBP8.28□□□□□ -1.08
MSI2-209ENST00000579483 MST1LQ2TV78 715 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 MUC21Q5SSG8 566 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 ERASQ7Z444 233 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 RPL36AP83881 106 aaKnown RBP8.28□□□□□ -1.08
MSI2-209ENST00000579483 NMSQ5H8A3 153 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 ZNF833PQ6ZTB9 187 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 RPL36ALQ969Q0 106 aaKnown RBP8.28□□□□□ -1.08
MSI2-209ENST00000579483 SLC25A39Q9BZJ4 359 aaPredicted RBP8.28□□□□□ -1.08
MSI2-209ENST00000579483 ST20Q9HBF5 79 aa8.28□□□□□ -1.08
MSI2-209ENST00000579483 TRAV34A0A0B4J273 112 aa8.27□□□□□ -1.08
MSI2-209ENST00000579483 C5orf52A6NGY3 159 aa8.27□□□□□ -1.08
MSI2-209ENST00000579483 ZNF98A6NK75 572 aa8.27□□□□□ -1.08
MSI2-209ENST00000579483 GHRHP01286 108 aa8.27□□□□□ -1.08
MSI2-209ENST00000579483 ZNF138P52744 262 aa8.27□□□□□ -1.08
MSI2-209ENST00000579483 LHFPL4Q7Z7J7 247 aa8.27□□□□□ -1.08
MSI2-209ENST00000579483 OR10D4PQ8NGN7 298 aa8.27□□□□□ -1.08
MSI2-209ENST00000579483 NOTCH2Q04721 2471 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 LEPROTL1O95214 131 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 IGHV4-39P01824 125 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 COTL1Q14019 142 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 SPATA31B1PQ5VZV4 182 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 PSCAO43653 123 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 PPBPP02775 128 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 IFITM3Q01628 133 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 OR4D5Q8NGN0 318 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 IGKV1D-8A0A087WSZ0 117 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 MPTX1A8MV57 137 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 EREGO14944 169 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 DKK1O94907 266 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 CCL20P78556 96 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 PRELID3AQ96N28 172 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 DCAF16Q9NXF7 216 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 MRPL27Q9P0M9 148 aaKnown RBP8.27□□□□□ -1.09
MSI2-209ENST00000579483 ZGRF1Q86YA3 2104 aa8.27□□□□□ -1.09
MSI2-209ENST00000579483 IGHV4-61A0A0C4DH41 118 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms