RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 EDN2P20800 178 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 BMI1P35226 326 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 EGFEM1PQ0D2K5 195 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 OR2F1Q13607 317 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 RAB31Q13636 194 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 VWC2Q2TAL6 325 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 DEFB114Q30KQ6 69 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 BEAN1Q3B7T3 259 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 Q5BKY6 102 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 CYP2G1PQ6ZSU1 146 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 BPIFCQ8NFQ6 507 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 OR5C1Q8NGR4 320 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 NARS2Q96I59 477 aaKnown RBP11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 HSPB11Q9Y547 144 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 WNK1Q9H4A3 2382 aa11.8□□□□□ -0.52
SLC6A4-205ENST00000579221 TRRAPQ9Y4A5 3859 aa11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 SELENOTP62341 195 aa11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 KPRPQ5T749 579 aaPredicted RBP11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 ZNF546Q86UE3 836 aa11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 RHPN1-AS1Q9BWJ2 59 aa11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 PFDN2Q9UHV9 154 aa11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 RABAC1Q9UI14 185 aa11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 WDR83OSQ9Y284 106 aa11.79□□□□□ -0.52
SLC6A4-205ENST00000579221 A0A1W2PS18 150 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 CHEK1O14757 476 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 HNRNPCP07910 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 CRYBB3P26998 211 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 LCN12Q6JVE5 192 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 INO80EQ8NBZ0 244 aaPredicted RBP11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 RNF125Q96EQ8 232 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 PBDC1Q9BVG4 233 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 TMEM231Q9H6L2 316 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 MLXQ9UH92 298 aa11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 LSM4Q9Y4Z0 139 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-205ENST00000579221 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 IGHV3-49A0A0A0MS15 119 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 AGPAT2O15120 278 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 MPDU1O75352 247 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 DFFBO76075 338 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 KRTAP10-11P60412 298 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 LYZP61626 148 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 CLINT1Q14677 625 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 CD300EQ496F6 205 aaPredicted RBP11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 LAMTOR1Q6IAA8 161 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 BTNL8Q6UX41 500 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 VWFP04275 2813 aa11.77□□□□□ -0.53
SLC6A4-205ENST00000579221 hCG_2014768A0A024R1R8 64 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 UBE2L5PA0A1B0GUS4 154 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 APOHP02749 345 aaPredicted RBP11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 CD5P06127 495 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 GATA2P23769 480 aaPredicted RBP11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 S100A7P31151 101 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 CAMLGP49069 296 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 EIF2B2P49770 351 aaKnown RBP11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 USF2Q15853 346 aaPredicted RBP11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 TMEM182Q6ZP80 229 aaPredicted RBP11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 RBPMS2Q6ZRY4 209 aaKnown RBP11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 AQP10Q96PS8 301 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 MGST2Q99735 147 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 ATP5SQ99766 215 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 SLC45A2Q9UMX9 530 aa11.76□□□□□ -0.53
SLC6A4-205ENST00000579221 IGHV3OR16-13A0A075B7E8 117 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 IGHV3-74A0A0B4J1X5 117 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 IFNA5P01569 189 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 ORM2P19652 201 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 FGF7P21781 194 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 S100A7AQ86SG5 101 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 SCGB1C1Q8TD33 95 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 ST8SIA2Q92186 375 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 RNF2Q99496 336 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 SMIM3Q9BZL3 60 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 TNFSF18Q9UNG2 199 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 ZNF256Q9Y2P7 627 aaPredicted RBP11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 U3KQE9 123 aa11.75□□□□□ -0.53
SLC6A4-205ENST00000579221 IGHV3-66A0A0C4DH42 116 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 IZUMO1RA6ND01 250 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 SMLR1H3BR10 107 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 HYPMO75409 117 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 LINC00869P0C866 280 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 GP9P14770 177 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 AP2S1P53680 142 aaPredicted RBP11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 PLP1P60201 277 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 OR1B1Q8NGR6 318 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 PPP1R14BQ96C90 147 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 SELENOKQ9Y6D0 94 aa11.74□□□□□ -0.53
SLC6A4-205ENST00000579221 ZNF785A8K8V0 405 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 G3V3Q6 166 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 RPL29P47914 159 aaKnown RBP11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 GUCA2BQ16661 112 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 Q6ZRG5 221 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 TMEM61Q8N0U2 210 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 ZNF709Q8N972 641 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 NEURL2Q9BR09 285 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 GGTLC1Q9BX51 225 aa11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 WDR61Q9GZS3 305 aaKnown RBP11.73□□□□□ -0.53
SLC6A4-205ENST00000579221 ARL6Q9H0F7 186 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms