RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 GSTZ1O43708 216 aaPredicted RBP6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 GIG44P09565 113 aaPredicted RBP6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 RBMY1A1P0DJD3 496 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 RBMY1CP0DJD4 496 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PSG1P11464 419 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 MIFP14174 115 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 CCR6P51684 374 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 RBMY1FQ15415 496 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 NMSQ5H8A3 153 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 MCFD2Q8NI22 146 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 RNF125Q96EQ8 232 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 RAB40CQ96S21 281 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 WDR12Q9GZL7 423 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 TBC1D24Q9ULP9 559 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 U3KQ87 197 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 U3KQE9 123 aa6.69□□□□□ -1.34
CDK5RAP3-211ENST00000578996 FRAS1Q86XX4 4008 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 A0A0B4J2A0 478 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 C11orf94C9JXX5 98 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 FAM90A26D6RGX4 464 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 IGKV3-20P01619 116 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 IAPPP10997 89 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 HLA-DMBP28068 263 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 TNFSF8P32971 234 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 FAUP35544 74 aaKnown RBP6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 LYZP61626 148 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 NUTF2P61970 127 aaKnown RBP6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 SUPT4H1P63272 117 aaKnown RBP6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 SRPXP78539 464 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 KLF9Q13886 244 aaPredicted RBP6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 ZNF846Q147U1 533 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PYDC2Q56P42 97 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 Q6ZTC4 211 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 ZNF767PQ75MW2 155 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PPP1R14BQ96C90 147 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 SLC35E1Q96K37 410 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 XCL2Q9UBD3 114 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 HSPB7Q9UBY9 170 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 SHPKQ9UHJ6 478 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 X6R8D5 127 aa6.68□□□□□ -1.34
CDK5RAP3-211ENST00000578996 IGHV3OR16-12A0A075B7B8 117 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 ELOA3CA0A087WX78 387 aaPredicted RBP6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 TRAV10A0A0B4J240 114 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 ZNF705EA8MWA4 302 aaPredicted RBP6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 BUB3O43684 328 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 VAMP1P23763 118 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 S100A5P33763 92 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 FXYD7P58549 80 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PRR20EP86478 221 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PRR20CP86479 221 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PRR20DP86480 221 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PRR20BP86481 221 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PRR20AP86496 221 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 ZNF90Q03938 601 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 GSG1LQ6UXU4 331 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 TOMM5Q8N4H5 51 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 COQ8AQ8NI60 647 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 LINC00052Q96N35 136 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 C1QTNF4Q9BXJ3 329 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 HRH4Q9H3N8 390 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PFDN2Q9UHV9 154 aa6.67□□□□□ -1.34
CDK5RAP3-211ENST00000578996 NUP62P37198 522 aaPredicted RBP6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 TCTAP57738 103 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 AP3S2P59780 193 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 DEFB1P60022 68 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 RAB11AP62491 216 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 OR2F1Q13607 317 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 GAMTQ14353 236 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 CCDC190Q86UF4 302 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 APLNQ9ULZ1 77 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 CELA1Q9UNI1 258 aa6.66□□□□□ -1.34
CDK5RAP3-211ENST00000578996 IGHV4-4A0A075B6R2 117 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 IGKV1D-37A0A075B6S9 117 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 PIGBOS1A0A0B4J2F0 54 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 SNRPGP15A8MWD9 76 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 H3BMM0 161 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 FABP1P07148 127 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 HLA-DRB4P13762 266 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 GPX4P36969 197 aaPredicted RBP6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 ID1P41134 155 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 NKX2-1P43699 371 aaPredicted RBP6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 EMP1P54849 157 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 TMEM128Q5BJH2 165 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 GDF5OSQ5U4N7 250 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 OR8G2PQ6IF36 304 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 OR4B1Q8NGF8 309 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 MAGT1Q9H0U3 335 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 HLA-DRB4X5D2U9 266 aa6.65□□□□□ -1.34
CDK5RAP3-211ENST00000578996 DEFB131BA0A096LNP1 70 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 DUXBA0A1W2PPF3 345 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 WRBO00258 174 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 HOXB5P09067 269 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 ATP5IP56385 69 aaPredicted RBP6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 RPP30P78346 268 aaKnown RBP6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SPANXN2Q5MJ10 180 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 OR8I2Q8N0Y5 310 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 TRIM63Q969Q1 353 aa6.64□□□□□ -1.35
CDK5RAP3-211ENST00000578996 SOSTQ9BQB4 213 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms