RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 AGRNO00468 2067 aa11.57□□□□□ -0.56
CRLF3-203ENST00000578692 DUXBA0A1W2PPF3 345 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 PITX3O75364 302 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 S100A5P33763 92 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 GPX4P36969 197 aaPredicted RBP11.56□□□□□ -0.56
CRLF3-203ENST00000578692 GAMTQ14353 236 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 PSMG4Q5JS54 123 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 SIGLEC15Q6ZMC9 328 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 OR51G1Q8NGK1 321 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 FBXL17Q9UF56 701 aa11.56□□□□□ -0.56
CRLF3-203ENST00000578692 ZFP92A6NM28 416 aa11.55□□□□□ -0.56
CRLF3-203ENST00000578692 SNRPD3P62318 126 aaKnown RBP11.55□□□□□ -0.56
CRLF3-203ENST00000578692 DEDD2Q8WXF8 326 aa11.55□□□□□ -0.56
CRLF3-203ENST00000578692 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
CRLF3-203ENST00000578692 SLC25A21Q9BQT8 299 aaPredicted RBP11.55□□□□□ -0.56
CRLF3-203ENST00000578692 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
CRLF3-203ENST00000578692 NRN1Q9NPD7 142 aa11.55□□□□□ -0.56
CRLF3-203ENST00000578692 FAM90A26D6RGX4 464 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 SLC25A6P12236 298 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 VAMP1P23763 118 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 ZNF79Q15937 498 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 LRTM2Q8N967 370 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 Q8NAQ8 132 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 SLC35E1Q96K37 410 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 PBDC1Q9BVG4 233 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 PFDN2Q9UHV9 154 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 IGKV1D-37A0A075B6S9 117 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 MIFP14174 115 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 C4BPBP20851 252 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 RAB11AP62491 216 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 ZNF90Q03938 601 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 CCDC190Q86UF4 302 aa11.54□□□□□ -0.56
CRLF3-203ENST00000578692 ZNF705EA8MWA4 302 aaPredicted RBP11.53□□□□□ -0.56
CRLF3-203ENST00000578692 SNRPGP15A8MWD9 76 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 MED6O75586 246 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 SFT2D2O95562 160 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
CRLF3-203ENST00000578692 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 IAPPP10997 89 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 NUP62P37198 522 aaPredicted RBP11.53□□□□□ -0.56
CRLF3-203ENST00000578692 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
CRLF3-203ENST00000578692 LGALS9CQ6DKI2 356 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 OR8G2PQ6IF36 304 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 CSNK1G2-AS1Q8NCQ2 148 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 TMED3Q9Y3Q3 217 aa11.53□□□□□ -0.56
CRLF3-203ENST00000578692 IGHV4-28A0A0C4DH34 117 aa11.52□□□□□ -0.57
CRLF3-203ENST00000578692 FABP1P07148 127 aa11.52□□□□□ -0.57
CRLF3-203ENST00000578692 NUTF2P61970 127 aaKnown RBP11.52□□□□□ -0.57
CRLF3-203ENST00000578692 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
CRLF3-203ENST00000578692 CENPSQ8N2Z9 138 aa11.52□□□□□ -0.57
CRLF3-203ENST00000578692 C2CD4CQ8TF44 421 aa11.52□□□□□ -0.57
CRLF3-203ENST00000578692 HRH4Q9H3N8 390 aa11.52□□□□□ -0.57
CRLF3-203ENST00000578692 PAIP2BQ9ULR5 123 aaKnown RBP11.52□□□□□ -0.57
CRLF3-203ENST00000578692 X6R8D5 127 aa11.52□□□□□ -0.57
CRLF3-203ENST00000578692 BIRC6Q9NR09 4857 aa11.51□□□□□ -0.57
CRLF3-203ENST00000578692 H3BMM0 161 aa11.51□□□□□ -0.57
CRLF3-203ENST00000578692 HOXB5P09067 269 aa11.51□□□□□ -0.57
CRLF3-203ENST00000578692 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
CRLF3-203ENST00000578692 CIB3Q96Q77 187 aaPredicted RBP11.51□□□□□ -0.57
CRLF3-203ENST00000578692 C1QTNF4Q9BXJ3 329 aa11.51□□□□□ -0.57
CRLF3-203ENST00000578692 TBC1D24Q9ULP9 559 aa11.51□□□□□ -0.57
CRLF3-203ENST00000578692 C11orf94C9JXX5 98 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 WRBO00258 174 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 SYNGR2O43760 224 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 NKX2-1P43699 371 aaPredicted RBP11.5□□□□□ -0.57
CRLF3-203ENST00000578692 TCTAP57738 103 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 LYZP61626 148 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 OR2F1Q13607 317 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 SPANXN2Q5MJ10 180 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 C1orf194Q5T5A4 169 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 RPP25LQ8N5L8 163 aaKnown RBP11.5□□□□□ -0.57
CRLF3-203ENST00000578692 TRGV9Q99603 122 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 MAGT1Q9H0U3 335 aa11.5□□□□□ -0.57
CRLF3-203ENST00000578692 RBM38Q9H0Z9 239 aaKnown RBP11.5□□□□□ -0.57
CRLF3-203ENST00000578692 IGKV1OR2-108A0A075B7D4 117 aa11.49□□□□□ -0.57
CRLF3-203ENST00000578692 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
CRLF3-203ENST00000578692 GGNBP1Q5YKI7 109 aa11.49□□□□□ -0.57
CRLF3-203ENST00000578692 SRRQ9GZT4 340 aa11.49□□□□□ -0.57
CRLF3-203ENST00000578692 XCL2Q9UBD3 114 aa11.49□□□□□ -0.57
CRLF3-203ENST00000578692 IGLL5B9A064 214 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 ZNF701M0R085 212 aaPredicted RBP11.48□□□□□ -0.57
CRLF3-203ENST00000578692 DEDDO75618 318 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 ID1P41134 155 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 INPP1P49441 399 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 UBE2MP61081 183 aaKnown RBP11.48□□□□□ -0.57
CRLF3-203ENST00000578692 THAP8Q8NA92 274 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 PPP1R14BQ96C90 147 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 WDR12Q9GZL7 423 aaKnown RBP11.48□□□□□ -0.57
CRLF3-203ENST00000578692 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
CRLF3-203ENST00000578692 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
CRLF3-203ENST00000578692 CFDP00746 253 aaPredicted RBP11.47□□□□□ -0.57
CRLF3-203ENST00000578692 BAK1Q16611 211 aa11.47□□□□□ -0.57
CRLF3-203ENST00000578692 SPANXN5Q5MJ07 72 aa11.47□□□□□ -0.57
CRLF3-203ENST00000578692 GDF5OSQ5U4N7 250 aa11.47□□□□□ -0.57
CRLF3-203ENST00000578692 OR8I2Q8N0Y5 310 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms