RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CHODLQ9H9P2 273 aa9.9□□□□□ -0.83
ERBB2-206ENST00000578373 DPM3Q9P2X0 92 aa9.9□□□□□ -0.83
ERBB2-206ENST00000578373 EPDR1Q9UM22 224 aa9.9□□□□□ -0.83
ERBB2-206ENST00000578373 HERVK_113P61574 105 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 HAPLN4Q86UW8 402 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 PRELID3AQ96N28 172 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.89□□□□□ -0.83
ERBB2-206ENST00000578373 PLA2G5P39877 138 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 PPP1R27Q86WC6 154 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 ZNF114Q8NC26 417 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.89□□□□□ -0.83
ERBB2-206ENST00000578373 NUDT10Q8NFP7 164 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 NUDT11Q96G61 164 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 EREGO14944 169 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 APOBEC3AP31941 199 aaPredicted RBP9.89□□□□□ -0.83
ERBB2-206ENST00000578373 CDKN1AP38936 164 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 CLEC2AQ6UVW9 174 aa9.89□□□□□ -0.83
ERBB2-206ENST00000578373 LSM4Q9Y4Z0 139 aaKnown RBP9.89□□□□□ -0.83
ERBB2-206ENST00000578373 TM4SF5O14894 197 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 OR1N2Q8NGR9 330 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 CDC42EP3Q9UKI2 254 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 A0A1W2PRE2 83 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 CIARTQ8N365 385 aaPredicted RBP9.88□□□□□ -0.83
ERBB2-206ENST00000578373 OSTCQ9NRP0 149 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 KIF26AQ9ULI4 1882 aaPredicted RBP9.88□□□□□ -0.83
ERBB2-206ENST00000578373 PFN1P07737 140 aaKnown RBP9.88□□□□□ -0.83
ERBB2-206ENST00000578373 DNLZQ5SXM8 178 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 MDS2Q8NDY4 140 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 ZNF414Q96IQ9 312 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 C21orf62Q9NYP8 219 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 FBXL7Q9UJT9 491 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 PMS2P5A8MQ11 134 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 UCNP55089 124 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 PLP1P60201 277 aa9.88□□□□□ -0.83
ERBB2-206ENST00000578373 B9A039 149 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 IGHV3-11P01762 117 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 ZNF124Q15973 351 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 TECTAO75443 2155 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 C5orf42Q9H799 3197 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 TCRBV4S1A1TA0A5B7 111 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 SRSF7Q16629 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
ERBB2-206ENST00000578373 IGFL4Q6B9Z1 124 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 Q6ZR03 302 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 NIT1Q86X76 327 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 FAM57AQ8TBR7 257 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 DYNLRB2Q8TF09 96 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 HIST1H4GQ99525 98 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 SCRT1Q9BWW7 348 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 TIMM23O14925 209 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 FOXL1Q12952 345 aa9.87□□□□□ -0.83
ERBB2-206ENST00000578373 TMEM200BQ69YZ2 307 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 RNASEH2CQ8TDP1 164 aaKnown RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 GLMPQ8WWB7 406 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 NEUROG1Q92886 237 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 RNASE6Q93091 150 aaKnown RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 TMEM133Q9H2Q1 129 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 MBNL3Q9NUK0 354 aaKnown RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 SLC25A15Q9Y619 301 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 ALPK3Q96L96 1907 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 IGHV3OR16-12A0A075B7B8 117 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 NPIPB5A8MRT5 1133 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 IGHV2-5P01817 119 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 PRSS2P07478 247 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 HIST1H1AQ02539 215 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 C10orf91Q5T1B1 145 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 ZNF474Q6S9Z5 364 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 CLEC19AQ6UXS0 136 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 LYPD6Q86Y78 171 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 COL25A1Q9BXS0 654 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 TRBV6-6A0A0A6YYG2 114 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 GPX1P07203 203 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 FABP2P12104 132 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 AREGP15514 252 aa9.86□□□□□ -0.83
ERBB2-206ENST00000578373 ATP5IP56385 69 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 MEF2CQ06413 473 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 FGF23Q9GZV9 251 aaPredicted RBP9.86□□□□□ -0.83
ERBB2-206ENST00000578373 C3orf79P0CE67 100 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 PSG1P11464 419 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 NPPCP23582 126 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 ACTL10Q5JWF8 245 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 LYPD2Q6UXB3 125 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 Q6ZS49 121 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 PLSCR4Q9NRQ2 329 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 C9JCJ5 164 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 CRXO43186 299 aaPredicted RBP9.85□□□□□ -0.83
ERBB2-206ENST00000578373 TRAV30A0A087WSZ9 112 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 LYRM7Q5U5X0 104 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 WFDC12Q8WWY7 111 aa9.85□□□□□ -0.83
ERBB2-206ENST00000578373 hDV102S1A0JD36 115 aa9.84□□□□□ -0.83
ERBB2-206ENST00000578373 LINC00614P0C842 121 aa9.84□□□□□ -0.83
ERBB2-206ENST00000578373 ATP5J2P56134 94 aa9.84□□□□□ -0.83
ERBB2-206ENST00000578373 TMPRSS3P57727 454 aa9.84□□□□□ -0.83
ERBB2-206ENST00000578373 TMEM30BQ3MIR4 351 aa9.84□□□□□ -0.83
ERBB2-206ENST00000578373 RNF125Q96EQ8 232 aa9.84□□□□□ -0.83
ERBB2-206ENST00000578373 GNB1LQ9BYB4 327 aa9.84□□□□□ -0.83
ERBB2-206ENST00000578373 A1L4Q6 167 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms