RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 VN1R2Q8NFZ6 395 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 OR10P1Q8NGE3 313 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 OR5A1Q8NGJ0 315 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 OR2AE1Q8NHA4 323 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 SGMS2Q8NHU3 365 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 OTOSQ8NHW6 89 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 PPTC7Q8NI37 304 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 KCNG3Q8TAE7 436 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 TSKUQ8WUA8 353 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 RTN4IP1Q8WWV3 396 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 MBD3L1Q8WWY6 194 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 CHCHD10Q8WYQ3 142 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 C8orf44Q96CB5 159 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 GNPNAT1Q96EK6 184 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 ADAT3Q96EY9 351 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 ABHD14BQ96IU4 210 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 PGLYRP4Q96LB8 373 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 C18orf15Q96N68 181 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 GPR82Q96P67 336 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 SPACA5Q96QH8 159 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 GPER1Q99527 375 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 SIGMAR1Q99720 223 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 NAA38Q9BRA0 125 aaKnown RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 HDHD3Q9BSH5 251 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 PSMG3Q9BT73 122 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 TMEM59Q9BXS4 323 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 WDR61Q9GZS3 305 aaKnown RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 BANF2Q9H503 90 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 GEMIN7Q9H840 131 aaKnown RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 ST20Q9HBF5 79 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 RPRMQ9NS64 109 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 JPT1Q9UK76 154 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 NXT1Q9UKK6 140 aaKnown RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 ERG28Q9UKR5 140 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 CES1P1Q9UKY3 287 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 MCTS1Q9ULC4 181 aaKnown RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 BOKQ9UMX3 212 aaPredicted RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 HS3ST2Q9Y278 367 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 SLC17A4Q9Y2C5 497 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 HILPDAQ9Y5L2 63 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 LHFPL6Q9Y693 200 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 SPCS1Q9Y6A9 102 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 UTRNP46939 3433 aa1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 SNRNP200O75643 2136 aaKnown RBP1.45□□□□□ -2.18
PTP4A1-204ENST00000578299 CACNA1CQ13936 2221 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 DOCK8Q8NF50 2099 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 TRPM6Q9BX84 2022 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 OBSL1O75147 1896 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 TRBV20OR9-2A0A075B6H5 130 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 TRAV9-1A0A075B6T8 112 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 IGHV3OR16-13A0A075B7E8 117 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 IGLV1-36A0A0B4J1U3 117 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 TRBV9A0A0B4J1U6 114 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 IGKV1-8A0A0C4DH67 115 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A0G2JLM5 398 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A0G2JMM0 328 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A0J9YY10 115 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 KBTBD11-OT1A0A1B0GTJ5 212 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 LOC102725191A0A1B0GVB3 256 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A1B0GX78 115 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A1W2PPB8 328 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 A0A1W2PPV9 198 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 LRP5LA4QPB2 252 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 DPRXA6NFQ7 191 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 OR4C46A6NHA9 309 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 C2orf70A6NJV1 201 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 KIR3DP1A8MWS1 328 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 C11orf94C9JXX5 98 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 H3BRM9 83 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 H3BUT2 72 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 M0R2Z0 102 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 ISLRO14498 428 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 SIVA1O15304 175 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 CXCL13O43927 109 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 NAPSAO96009 420 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 NRASP01111 189 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 IFNA5P01569 189 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 IGKV1D-16P01601 117 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 MT-ATP8P03928 68 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 ISG15P05161 165 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 IGHV4-34P06331 123 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 SERPINE2P07093 398 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 CT62P0C5K7 136 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 CISD3P0C7P0 127 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 ASAH2BP0C7U1 165 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 HIST1H1EP10412 219 aaKnown RBP1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 FGF6P10767 208 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 IAPPP10997 89 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 PSG2P11465 335 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 DEFA4P12838 97 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 CCL2P13500 99 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 CPMP14384 443 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 NTF3P20783 257 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 HIST1H1TP22492 207 aaPredicted RBP1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 NPPCP23582 126 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 NPY1RP25929 384 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 HTR1DP28221 377 aa1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 PEBP1P30086 187 aaKnown RBP1.44□□□□□ -2.18
PTP4A1-204ENST00000578299 CD70P32970 193 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms