RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 PBDC1Q9BVG4 233 aa8.65□□□□□ -1.02
GGA3-204ENST00000578208 RETNQ9HD89 108 aa8.65□□□□□ -1.02
GGA3-204ENST00000578208 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
GGA3-204ENST00000578208 GSKIPQ9P0R6 139 aa8.65□□□□□ -1.02
GGA3-204ENST00000578208 SMCO3A2RU48 225 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 FAM25EA8MYX2 175 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 C3orf84H3BNL1 204 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 UPK1BO75841 260 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 AP2S1P53680 142 aaPredicted RBP8.64□□□□□ -1.03
GGA3-204ENST00000578208 LYZP61626 148 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 ID3Q02535 119 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 ASAH1Q13510 395 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 STPG3Q8N7X2 389 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 ZBTB8BQ8NAP8 495 aaPredicted RBP8.64□□□□□ -1.03
GGA3-204ENST00000578208 MUC7Q8TAX7 377 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 PPP1R14BQ96C90 147 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 RAB40CQ96S21 281 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 TRGV9Q99603 122 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 SEC22CQ9BRL7 303 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
GGA3-204ENST00000578208 C5orf51A6NDU8 294 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 L7N2F9 121 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 UBE2CO00762 179 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 CCSO14618 274 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 CFDP00746 253 aaPredicted RBP8.63□□□□□ -1.03
GGA3-204ENST00000578208 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
GGA3-204ENST00000578208 VAMP2P63027 116 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 ZNF90Q03938 601 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 USF2Q15853 346 aaPredicted RBP8.63□□□□□ -1.03
GGA3-204ENST00000578208 OR8G2PQ6IF36 304 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 C16orf54Q6UWD8 224 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 APRG1Q8IVJ8 170 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 C12orf45Q8N5I9 185 aaPredicted RBP8.63□□□□□ -1.03
GGA3-204ENST00000578208 GPN1Q9HCN4 374 aaPredicted RBP8.63□□□□□ -1.03
GGA3-204ENST00000578208 TBC1D24Q9ULP9 559 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 U3KQE9 123 aa8.63□□□□□ -1.03
GGA3-204ENST00000578208 KIR2DL5BA0A0G2JN68 375 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 KIR2DL5BA0A0G2JPC4 375 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 SNRPGP15A8MWD9 76 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 LYL1P12980 280 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 S100A7P31151 101 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 DEFA1P59665 94 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 DEFA3P59666 94 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 DEFB131AP59861 70 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 OR2F1Q13607 317 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 SIGLEC15Q6ZMC9 328 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 ACOT7LQ6ZUV0 252 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 KIR2DL5AQ8N109 375 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 THAP8Q8NA92 274 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 BPIFCQ8NFQ6 507 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 KIR2DL5BQ8NHK3 375 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 SMIM8Q96KF7 97 aa8.62□□□□□ -1.03
GGA3-204ENST00000578208 HUWE1Q7Z6Z7 4374 aaKnown RBP8.62□□□□□ -1.03
GGA3-204ENST00000578208 IGKV1D-37A0A075B6S9 117 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 PRSS46E5RG02 174 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 K7EQG2 157 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 TSC22D2O75157 780 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 PVALBP20472 110 aaPredicted RBP8.61□□□□□ -1.03
GGA3-204ENST00000578208 TAS2R30P59541 319 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 GSG1LQ6UXU4 331 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 STHQ8IWL8 128 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 OR10P1Q8NGE3 313 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 GLMPQ8WWB7 406 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 MGAT4CQ9UBM8 478 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 FBXL17Q9UF56 701 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 TP53TG1Q9Y2A0 90 aa8.61□□□□□ -1.03
GGA3-204ENST00000578208 RCL1Q9Y2P8 373 aaKnown RBP8.61□□□□□ -1.03
GGA3-204ENST00000578208 LSM5Q9Y4Y9 91 aaKnown RBP8.61□□□□□ -1.03
GGA3-204ENST00000578208 SPRY2O43597 315 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 BUB3O43684 328 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 MBPP02686 304 aaPredicted RBP8.6□□□□□ -1.03
GGA3-204ENST00000578208 IL5P05113 134 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 METTL15P1P0C7V9 234 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 ZNF688P0C7X2 276 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 BCAP31P51572 246 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 RRAS2P62070 204 aaPredicted RBP8.6□□□□□ -1.03
GGA3-204ENST00000578208 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
GGA3-204ENST00000578208 DLK1P80370 383 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 ZNF124Q15973 351 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 DEFB135Q30KP9 77 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 LEMD1Q68G75 181 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 Q6ZWC4 215 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 TMEM144Q7Z5S9 345 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 NRN1Q9NPD7 142 aa8.6□□□□□ -1.03
GGA3-204ENST00000578208 IGKV1OR2-108A0A075B7D4 117 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 PRAF2O60831 178 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 PAX9P55771 341 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 S100A10P60903 97 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 TMEM14EPQ6UXP3 125 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 FAM24BQ8N5W8 94 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 DCANP1Q8TF63 244 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 C2orf50Q96LR7 162 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 TMEM147Q9BVK8 224 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 CSTL1Q9H114 145 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 SLC45A2Q9UMX9 530 aa8.59□□□□□ -1.03
GGA3-204ENST00000578208 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms