RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 CLEC19AQ6UXS0 136 aa11.82□□□□□ -0.52
SS18-206ENST00000577572 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
SS18-206ENST00000577572 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
SS18-206ENST00000577572 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
SS18-206ENST00000577572 MRPL32Q9BYC8 188 aaKnown RBP11.82□□□□□ -0.52
SS18-206ENST00000577572 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
SS18-206ENST00000577572 PEF1Q9UBV8 284 aaKnown RBP11.82□□□□□ -0.52
SS18-206ENST00000577572 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
SS18-206ENST00000577572 RNF114Q9Y508 228 aa11.82□□□□□ -0.52
SS18-206ENST00000577572 A0A1W2PPV4 95 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 WI2-2373I1.2A0A1W2PRP0 233 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 ZNF705EA8MWA4 302 aaPredicted RBP11.81□□□□□ -0.52
SS18-206ENST00000577572 GGCTO75223 188 aaKnown RBP11.81□□□□□ -0.52
SS18-206ENST00000577572 HYPMO75409 117 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 HBE1P02100 147 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 RPLP1P05386 114 aaKnown RBP11.81□□□□□ -0.52
SS18-206ENST00000577572 ADMP35318 185 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 ELLP55199 621 aaPredicted RBP11.81□□□□□ -0.52
SS18-206ENST00000577572 RAB2AP61019 212 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 FOXL1Q12952 345 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
SS18-206ENST00000577572 LYPD6BQ8NI32 183 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 MBD3L1Q8WWY6 194 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 ZFHX3Q15911 3703 aa11.81□□□□□ -0.52
SS18-206ENST00000577572 MAST4O15021 2626 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 NUDT19A8MXV4 375 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 BMPR1BO00238 502 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 NDUFA4O00483 81 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 COX7A2P2O60397 106 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 NMBP08949 121 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 OR5G3P0C626 314 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 ARL3P36405 182 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 RNF125Q96EQ8 232 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 CHRDL1Q9BU40 450 aa11.8□□□□□ -0.52
SS18-206ENST00000577572 IGHV3-23P01764 117 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 H2AFB1P0C5Y9 115 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 TAS2R45P59539 299 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 PMS2P11Q13670 270 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 C10orf99Q6UWK7 81 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 GPHB5Q86YW7 130 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 STXBP6Q8NFX7 210 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 FAM213BQ8TBF2 198 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
SS18-206ENST00000577572 MED9Q9NWA0 146 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 MRPL27Q9P0M9 148 aaKnown RBP11.79□□□□□ -0.52
SS18-206ENST00000577572 FUT9Q9Y231 359 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 RFNGQ9Y644 331 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 S4R3C0 116 aa11.79□□□□□ -0.52
SS18-206ENST00000577572 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
SS18-206ENST00000577572 ZP3P21754 424 aa11.78□□□□□ -0.52
SS18-206ENST00000577572 GATA2P23769 480 aaPredicted RBP11.78□□□□□ -0.52
SS18-206ENST00000577572 CDC34P49427 236 aaPredicted RBP11.78□□□□□ -0.52
SS18-206ENST00000577572 DEFA5Q01523 94 aa11.78□□□□□ -0.52
SS18-206ENST00000577572 NDUFA5Q16718 116 aa11.78□□□□□ -0.52
SS18-206ENST00000577572 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
SS18-206ENST00000577572 TMEM37Q8WXS4 190 aa11.78□□□□□ -0.52
SS18-206ENST00000577572 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
SS18-206ENST00000577572 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
SS18-206ENST00000577572 TSSC4Q9Y5U2 329 aaPredicted RBP11.78□□□□□ -0.52
SS18-206ENST00000577572 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
SS18-206ENST00000577572 I3L521 148 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 IGHV3-11P01762 117 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 IL4P05112 153 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 ORM2P19652 201 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 FAM106AQ4KMX7 169 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 FAM78BQ5VT40 261 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 TOMM20LQ6UXN7 152 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 RAB24Q969Q5 203 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 GNB4Q9HAV0 340 aa11.77□□□□□ -0.53
SS18-206ENST00000577572 TECRQ9NZ01 308 aaKnown RBP11.77□□□□□ -0.53
SS18-206ENST00000577572 K7EMT4 169 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 STAG3L2P0CL84 134 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 STAG3L3P0CL85 134 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 FHITP49789 147 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 PPT1P50897 306 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 LYZP61626 148 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 GCSAMLQ5JQS6 135 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 FAM122CQ6P4D5 195 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 OR1B1Q8NGR6 318 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 SEPSECSQ9HD40 501 aaKnown RBP11.76□□□□□ -0.53
SS18-206ENST00000577572 RABAC1Q9UI14 185 aa11.76□□□□□ -0.53
SS18-206ENST00000577572 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
SS18-206ENST00000577572 PPP5D1E7EU14 171 aa11.75□□□□□ -0.53
SS18-206ENST00000577572 LGALS9O00182 355 aa11.75□□□□□ -0.53
SS18-206ENST00000577572 CXorf1O96002 111 aa11.75□□□□□ -0.53
SS18-206ENST00000577572 TAGLN2P37802 199 aaKnown RBP11.75□□□□□ -0.53
SS18-206ENST00000577572 ZNF726P1Q15940 193 aa11.75□□□□□ -0.53
SS18-206ENST00000577572 KHDC3LQ587J8 217 aa11.75□□□□□ -0.53
SS18-206ENST00000577572 C1orf194Q5T5A4 169 aa11.75□□□□□ -0.53
SS18-206ENST00000577572 IL34Q6ZMJ4 242 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms