RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 TAS2R45P59539 299 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 IQCJQ1A5X6 159 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 RUSC1-AS1Q66K80 236 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 Q6ZVH6 145 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 ZNF114Q8NC26 417 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 C19orf24Q9BVV8 132 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 TMEM167BQ9NRX6 74 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 CBY3A6NI87 242 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 NBR2O15453 112 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 COX7A2P2O60397 106 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 CBLN1P23435 193 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 KCNIP4Q6PIL6 250 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 PQLC2Q6ZP29 291 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 THAP8Q8NA92 274 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 C22orf15Q8WYQ4 148 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 ZNF503Q96F45 646 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 HSPB9Q9BQS6 159 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 DNAJC4Q9NNZ3 241 aa8.35□□□□□ -1.07
USP43-205ENST00000574408 C8orf88P0DMB2 117 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 BPIFB3P59826 476 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 TDRG1Q3Y452 100 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 MORN5Q5VZ52 161 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 TEX38Q6PEX7 206 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 C1orf122Q6ZSJ8 110 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 KIR3DL3Q8N743 410 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 EAF1Q96JC9 268 aaPredicted RBP8.34□□□□□ -1.07
USP43-205ENST00000574408 TNFRSF19Q9NS68 423 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 RPH3ALQ9UNE2 315 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 F11RQ9Y624 299 aaKnown RBP8.34□□□□□ -1.07
USP43-205ENST00000574408 COL12A1Q99715 3063 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 TRAV5A0A0B4J249 113 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 SLC17A3O00476 420 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 NPSP0C0P6 89 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 HOXB4P17483 251 aaPredicted RBP8.34□□□□□ -1.07
USP43-205ENST00000574408 FBLN7Q53RD9 439 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 SNHG12Q9BXW3 62 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 USP24Q9UPU5 2620 aa8.34□□□□□ -1.07
USP43-205ENST00000574408 MDFIC2A0A1B0GVS7 189 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 PSMB11A5LHX3 300 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 CRYGCP07315 174 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 SELENOTP62341 195 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 LINC01551Q86U37 167 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 TMEM183AQ8IXX5 376 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 DYNAPQ8N1N2 210 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 MRPL32Q9BYC8 188 aaKnown RBP8.33□□□□□ -1.08
USP43-205ENST00000574408 FLNCQ14315 2725 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 IER3P46695 156 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 C10orf113Q5VZT2 155 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 PVRIGQ6DKI7 326 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 RNF2Q99496 336 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 WNT10AQ9GZT5 417 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 TRBV20OR9-2A0A075B6H5 130 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 CORTO00230 105 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 CCDC144NLQ6NUI1 221 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 C1QL4Q86Z23 238 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 OR5AU1Q8NGC0 362 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 OR1L4Q8NGR5 311 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 SIRPDQ9H106 197 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 LPAR2Q9HBW0 351 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 ZNF355PQ9NSJ1 428 aa8.33□□□□□ -1.08
USP43-205ENST00000574408 ASH1LQ9NR48 2969 aaKnown RBP8.33□□□□□ -1.08
USP43-205ENST00000574408 IGHV2-70DA0A0C4DH43 119 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 IGHV4-39P01824 125 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 CNN1P51911 297 aaKnown RBP8.32□□□□□ -1.08
USP43-205ENST00000574408 LMO4P61968 165 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 UBE2L3P68036 154 aaKnown RBP8.32□□□□□ -1.08
USP43-205ENST00000574408 FXYD3Q14802 87 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 PATE2Q6UY27 113 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 FAM167A-AS1Q96KT0 104 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 NDUFAF3Q9BU61 184 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 VAMP8Q9BV40 100 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
USP43-205ENST00000574408 A8MWP6 167 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 OVOL3O00110 214 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 TOX4O94842 621 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 ORM2P19652 201 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 PAX2Q02962 417 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
USP43-205ENST00000574408 CMTM2Q8TAZ6 248 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 SLC25A2Q9BXI2 301 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 FAM208BQ5VWN6 2430 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 CREBBPQ92793 2442 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 C5orf64Q2M2E5 130 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 PRR27Q6MZM9 219 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 MRPL54Q6P161 138 aaKnown RBP8.32□□□□□ -1.08
USP43-205ENST00000574408 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 NPBQ8NG41 125 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 SGK494Q96LW2 274 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 NAGKQ9UJ70 344 aa8.32□□□□□ -1.08
USP43-205ENST00000574408 TRBV24-1A0A075B6N3 115 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 NCBP2LA6PVI3 153 aaKnown RBP8.31□□□□□ -1.08
USP43-205ENST00000574408 NDUFA3O95167 84 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 PFN1P07737 140 aaKnown RBP8.31□□□□□ -1.08
USP43-205ENST00000574408 PYYP10082 97 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
USP43-205ENST00000574408 MINOS1Q5TGZ0 78 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 NHLRC2Q8NBF2 726 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 OR1B1Q8NGR6 318 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms