RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 SLC35E1Q96K37 410 aa19.07■□□□□ 0.64
NPLOC4-215ENST00000574095 PAIP2BQ9ULR5 123 aaKnown RBP19.07■□□□□ 0.64
NPLOC4-215ENST00000574095 LINC00854A0A1B0GVQ3 168 aa19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 ZFP92A6NM28 416 aa19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 KNCNA6PVL3 124 aa19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 FAM90A26D6RGX4 464 aa19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 AP2S1P53680 142 aaPredicted RBP19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 ZNF90Q03938 601 aa19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 TRIQKQ629K1 86 aa19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 MAGT1Q9H0U3 335 aa19.06■□□□□ 0.64
NPLOC4-215ENST00000574095 IGKV1D-37A0A075B6S9 117 aa19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 BUB3O43684 328 aa19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 ATF4P18848 351 aaPredicted RBP19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 RAB11AP62491 216 aa19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 GGNBP1Q5YKI7 109 aa19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 TMEM217Q8N7C4 229 aa19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 RNF125Q96EQ8 232 aa19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 PBDC1Q9BVG4 233 aa19.05■□□□□ 0.64
NPLOC4-215ENST00000574095 NAP1L6A6NFF2 107 aa19.04■□□□□ 0.64
NPLOC4-215ENST00000574095 MED6O75586 246 aa19.04■□□□□ 0.64
NPLOC4-215ENST00000574095 TRPT1Q86TN4 253 aaKnown RBP19.04■□□□□ 0.64
NPLOC4-215ENST00000574095 SDHCQ99643 169 aaPredicted RBP19.04■□□□□ 0.64
NPLOC4-215ENST00000574095 FLVCR2Q9UPI3 526 aa19.04■□□□□ 0.64
NPLOC4-215ENST00000574095 WRBO00258 174 aa19.03■□□□□ 0.64
NPLOC4-215ENST00000574095 SYNGR2O43760 224 aa19.03■□□□□ 0.64
NPLOC4-215ENST00000574095 SIGLEC15Q6ZMC9 328 aa19.03■□□□□ 0.64
NPLOC4-215ENST00000574095 C9orf170A2RU37 121 aa19.02■□□□□ 0.64
NPLOC4-215ENST00000574095 NUPR2A6NF83 97 aa19.02■□□□□ 0.64
NPLOC4-215ENST00000574095 NDUFB6O95139 128 aa19.02■□□□□ 0.64
NPLOC4-215ENST00000574095 UBE2MP61081 183 aaKnown RBP19.02■□□□□ 0.64
NPLOC4-215ENST00000574095 PSMG4Q5JS54 123 aa19.02■□□□□ 0.64
NPLOC4-215ENST00000574095 ACTL10Q5JWF8 245 aa19.02■□□□□ 0.64
NPLOC4-215ENST00000574095 CEMP1Q6PRD7 247 aaPredicted RBP19.02■□□□□ 0.64
NPLOC4-215ENST00000574095 ADAP1O75689 374 aa19.01■□□□□ 0.63
NPLOC4-215ENST00000574095 GIG44P09565 113 aaPredicted RBP19.01■□□□□ 0.63
NPLOC4-215ENST00000574095 OR2F1Q13607 317 aa19.01■□□□□ 0.63
NPLOC4-215ENST00000574095 CIB3Q96Q77 187 aaPredicted RBP19.01■□□□□ 0.63
NPLOC4-215ENST00000574095 RAB40CQ96S21 281 aa19.01■□□□□ 0.63
NPLOC4-215ENST00000574095 NRN1Q9NPD7 142 aa19.01■□□□□ 0.63
NPLOC4-215ENST00000574095 DEFB4AO15263 64 aa18.99■□□□□ 0.63
NPLOC4-215ENST00000574095 LYZP61626 148 aa18.99■□□□□ 0.63
NPLOC4-215ENST00000574095 RPP30P78346 268 aaKnown RBP18.99■□□□□ 0.63
NPLOC4-215ENST00000574095 SPANXN5Q5MJ07 72 aa18.99■□□□□ 0.63
NPLOC4-215ENST00000574095 OR8G2PQ6IF36 304 aa18.99■□□□□ 0.63
NPLOC4-215ENST00000574095 MORN3Q6PF18 240 aaPredicted RBP18.99■□□□□ 0.63
NPLOC4-215ENST00000574095 IGKV1OR2-108A0A075B7D4 117 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 SNRPGP15A8MWD9 76 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 FABP1P07148 127 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 OR4E1P0C645 316 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 SPP1P10451 314 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 C4BPBP20851 252 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 BTCP35070 178 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 TRGV9Q99603 122 aa18.98■□□□□ 0.63
NPLOC4-215ENST00000574095 CENPXA8MT69 81 aa18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 PRSS46E5RG02 174 aa18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 H3BP45 60 aa18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 ANXA7P20073 488 aaKnown RBP18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 SNRPD3P62318 126 aaKnown RBP18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 THAP8Q8NA92 274 aa18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 COQ8AQ8NI60 647 aa18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 PHLDA1Q8WV24 401 aaPredicted RBP18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 C11orf68Q9H3H3 251 aaKnown RBP18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 PFDN2Q9UHV9 154 aa18.97■□□□□ 0.63
NPLOC4-215ENST00000574095 IL7P13232 177 aa18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 NUP62P37198 522 aaPredicted RBP18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 NANOS2P60321 138 aaKnown RBP18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 C11orf45Q8TAV5 145 aa18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 LINC00476Q8WZB0 136 aa18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 SEPSECSQ9HD40 501 aaKnown RBP18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 CLEC5AQ9NY25 188 aa18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 KLK5Q9Y337 293 aaPredicted RBP18.96■□□□□ 0.63
NPLOC4-215ENST00000574095 POLR2GP62487 172 aaKnown RBP eCLIP18.95■□□□□ 0.62
NPLOC4-215ENST00000574095 ID3Q02535 119 aa18.95■□□□□ 0.62
NPLOC4-215ENST00000574095 TMEM41BQ5BJD5 291 aa18.95■□□□□ 0.62
NPLOC4-215ENST00000574095 STRAPQ9Y3F4 350 aaKnown RBP18.95■□□□□ 0.62
NPLOC4-215ENST00000574095 C4orf46Q504U0 113 aa18.94■□□□□ 0.62
NPLOC4-215ENST00000574095 GSG1LQ6UXU4 331 aa18.94■□□□□ 0.62
NPLOC4-215ENST00000574095 PPP1R14BQ96C90 147 aa18.94■□□□□ 0.62
NPLOC4-215ENST00000574095 C7orf50Q9BRJ6 194 aaKnown RBP18.94■□□□□ 0.62
NPLOC4-215ENST00000574095 FBXL17Q9UF56 701 aa18.94■□□□□ 0.62
NPLOC4-215ENST00000574095 LY6G6CO95867 125 aa18.93■□□□□ 0.62
NPLOC4-215ENST00000574095 IFNA21P01568 189 aa18.93■□□□□ 0.62
NPLOC4-215ENST00000574095 NKX2-1P43699 371 aaPredicted RBP18.93■□□□□ 0.62
NPLOC4-215ENST00000574095 WDR12Q9GZL7 423 aaKnown RBP18.93■□□□□ 0.62
NPLOC4-215ENST00000574095 EPPK1P58107 5090 aaKnown RBP18.92■□□□□ 0.62
NPLOC4-215ENST00000574095 Q8NAQ8 132 aa18.92■□□□□ 0.62
NPLOC4-215ENST00000574095 OR4D5Q8NGN0 318 aa18.92■□□□□ 0.62
NPLOC4-215ENST00000574095 PSENENQ9NZ42 101 aa18.92■□□□□ 0.62
NPLOC4-215ENST00000574095 NDUFA13Q9P0J0 144 aa18.92■□□□□ 0.62
NPLOC4-215ENST00000574095 H3BMM0 161 aa18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 GATA2P23769 480 aaPredicted RBP18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 DEFB1P60022 68 aa18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 AKR1C1Q04828 323 aa18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 C1orf194Q5T5A4 169 aa18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 TMEM182Q6ZP80 229 aaPredicted RBP18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 CSNK1G2-AS1Q8NCQ2 148 aa18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 LINC00052Q96N35 136 aa18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 MFFQ9GZY8 342 aa18.91■□□□□ 0.62
NPLOC4-215ENST00000574095 IGHV4-28A0A0C4DH34 117 aa18.9■□□□□ 0.62
NPLOC4-215ENST00000574095 PLA2G10O15496 165 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms