RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 WFDC3Q8IUB2 231 aa20.57■□□□□ 0.88
SCARF1-207ENST00000573867 APRG1Q8IVJ8 170 aa20.57■□□□□ 0.88
SCARF1-207ENST00000573867 OR51G1Q8NGK1 321 aa20.57■□□□□ 0.88
SCARF1-207ENST00000573867 TMEM231Q9H6L2 316 aa20.57■□□□□ 0.88
SCARF1-207ENST00000573867 GSKIPQ9P0R6 139 aa20.57■□□□□ 0.88
SCARF1-207ENST00000573867 RCL1Q9Y2P8 373 aaKnown RBP20.57■□□□□ 0.88
SCARF1-207ENST00000573867 LOC102724200A0A096LPH7 203 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-207ENST00000573867 A0A1W2PS18 150 aa20.56■□□□□ 0.88
SCARF1-207ENST00000573867 PMS2P5A8MQ11 134 aa20.56■□□□□ 0.88
SCARF1-207ENST00000573867 CCNKO75909 580 aa20.56■□□□□ 0.88
SCARF1-207ENST00000573867 THAP8Q8NA92 274 aa20.56■□□□□ 0.88
SCARF1-207ENST00000573867 MAP6D1Q9H9H5 199 aa20.56■□□□□ 0.88
SCARF1-207ENST00000573867 PSENENQ9NZ42 101 aa20.56■□□□□ 0.88
SCARF1-207ENST00000573867 CD5P06127 495 aa20.55■□□□□ 0.88
SCARF1-207ENST00000573867 C16orf54Q6UWD8 224 aa20.55■□□□□ 0.88
SCARF1-207ENST00000573867 C12orf45Q8N5I9 185 aaPredicted RBP20.55■□□□□ 0.88
SCARF1-207ENST00000573867 GLMPQ8WWB7 406 aa20.55■□□□□ 0.88
SCARF1-207ENST00000573867 SMIM8Q96KF7 97 aa20.55■□□□□ 0.88
SCARF1-207ENST00000573867 MBPP02686 304 aaPredicted RBP20.54■□□□□ 0.88
SCARF1-207ENST00000573867 RPL11P62913 178 aaKnown RBP20.54■□□□□ 0.88
SCARF1-207ENST00000573867 ACOT7LQ6ZUV0 252 aa20.54■□□□□ 0.88
SCARF1-207ENST00000573867 RNF125Q96EQ8 232 aa20.54■□□□□ 0.88
SCARF1-207ENST00000573867 PAFAH1B2P68402 229 aa20.53■□□□□ 0.88
SCARF1-207ENST00000573867 OR2F1Q13607 317 aa20.53■□□□□ 0.88
SCARF1-207ENST00000573867 TRGV9Q99603 122 aa20.53■□□□□ 0.88
SCARF1-207ENST00000573867 EDA2RQ9HAV5 297 aa20.53■□□□□ 0.88
SCARF1-207ENST00000573867 TRAV2A0A0B4J234 112 aa20.52■□□□□ 0.88
SCARF1-207ENST00000573867 IL5P05113 134 aa20.52■□□□□ 0.88
SCARF1-207ENST00000573867 TMEM14EPQ6UXP3 125 aa20.52■□□□□ 0.88
SCARF1-207ENST00000573867 NRARPQ7Z6K4 114 aa20.52■□□□□ 0.88
SCARF1-207ENST00000573867 STPG3Q8N7X2 389 aa20.52■□□□□ 0.88
SCARF1-207ENST00000573867 ENKURQ8TC29 256 aa20.52■□□□□ 0.88
SCARF1-207ENST00000573867 NARS2Q96I59 477 aaKnown RBP20.52■□□□□ 0.88
SCARF1-207ENST00000573867 RABAC1Q9UI14 185 aa20.52■□□□□ 0.88
SCARF1-207ENST00000573867 KMT2CQ8NEZ4 4911 aaKnown RBP20.52■□□□□ 0.87
SCARF1-207ENST00000573867 FAM25EA8MYX2 175 aa20.51■□□□□ 0.87
SCARF1-207ENST00000573867 K7EQG2 157 aa20.51■□□□□ 0.87
SCARF1-207ENST00000573867 DNASE2O00115 360 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-207ENST00000573867 BUB3O43684 328 aa20.51■□□□□ 0.87
SCARF1-207ENST00000573867 OR8G2PQ6IF36 304 aa20.51■□□□□ 0.87
SCARF1-207ENST00000573867 STXBP6Q8NFX7 210 aa20.51■□□□□ 0.87
SCARF1-207ENST00000573867 PBDC1Q9BVG4 233 aa20.51■□□□□ 0.87
SCARF1-207ENST00000573867 METTL15P1P0C7V9 234 aa20.5■□□□□ 0.87
SCARF1-207ENST00000573867 RPL35AP18077 110 aaKnown RBP20.5■□□□□ 0.87
SCARF1-207ENST00000573867 TMEM182Q6ZP80 229 aaPredicted RBP20.5■□□□□ 0.87
SCARF1-207ENST00000573867 DCANP1Q8TF63 244 aa20.5■□□□□ 0.87
SCARF1-207ENST00000573867 GRAMD2BQ96HH9 432 aa20.5■□□□□ 0.87
SCARF1-207ENST00000573867 RAB40CQ96S21 281 aa20.5■□□□□ 0.87
SCARF1-207ENST00000573867 C7orf66A4D0T2 115 aa20.49■□□□□ 0.87
SCARF1-207ENST00000573867 LYZP61626 148 aa20.49■□□□□ 0.87
SCARF1-207ENST00000573867 C11orf1Q9H5F2 150 aa20.49■□□□□ 0.87
SCARF1-207ENST00000573867 C5orf51A6NDU8 294 aa20.48■□□□□ 0.87
SCARF1-207ENST00000573867 EIF2B2P49770 351 aaKnown RBP20.48■□□□□ 0.87
SCARF1-207ENST00000573867 TAS2R30P59541 319 aa20.48■□□□□ 0.87
SCARF1-207ENST00000573867 DEFB131AP59861 70 aa20.48■□□□□ 0.87
SCARF1-207ENST00000573867 ARL16Q0P5N6 197 aa20.48■□□□□ 0.87
SCARF1-207ENST00000573867 K7EPK0 472 aa20.47■□□□□ 0.87
SCARF1-207ENST00000573867 TSC22D2O75157 780 aa20.47■□□□□ 0.87
SCARF1-207ENST00000573867 GATA2P23769 480 aaPredicted RBP20.47■□□□□ 0.87
SCARF1-207ENST00000573867 CMC4P56277 68 aaPredicted RBP20.47■□□□□ 0.87
SCARF1-207ENST00000573867 AKR1C1Q04828 323 aa20.47■□□□□ 0.87
SCARF1-207ENST00000573867 LEMD1Q68G75 181 aa20.47■□□□□ 0.87
SCARF1-207ENST00000573867 C2orf50Q96LR7 162 aa20.47■□□□□ 0.87
SCARF1-207ENST00000573867 OVOL2Q9BRP0 275 aa20.47■□□□□ 0.87
SCARF1-207ENST00000573867 SNRPGP15A8MWD9 76 aa20.46■□□□□ 0.87
SCARF1-207ENST00000573867 RRAS2P62070 204 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-207ENST00000573867 IL15RAQ13261 267 aa20.46■□□□□ 0.87
SCARF1-207ENST00000573867 TMEM144Q7Z5S9 345 aa20.46■□□□□ 0.87
SCARF1-207ENST00000573867 LSM5Q9Y4Y9 91 aaKnown RBP20.46■□□□□ 0.87
SCARF1-207ENST00000573867 HELTA6NFD8 242 aa20.45■□□□□ 0.86
SCARF1-207ENST00000573867 FABP1P07148 127 aa20.45■□□□□ 0.86
SCARF1-207ENST00000573867 MUC7Q8TAX7 377 aa20.45■□□□□ 0.86
SCARF1-207ENST00000573867 SMCO3A2RU48 225 aa20.44■□□□□ 0.86
SCARF1-207ENST00000573867 ZNF688P0C7X2 276 aa20.44■□□□□ 0.86
SCARF1-207ENST00000573867 APOC4P55056 127 aa20.44■□□□□ 0.86
SCARF1-207ENST00000573867 DLK1P80370 383 aa20.44■□□□□ 0.86
SCARF1-207ENST00000573867 KIR2DL5BA0A0G2JN68 375 aa20.43■□□□□ 0.86
SCARF1-207ENST00000573867 KIR2DL5BA0A0G2JPC4 375 aa20.43■□□□□ 0.86
SCARF1-207ENST00000573867 GSG1LQ6UXU4 331 aa20.43■□□□□ 0.86
SCARF1-207ENST00000573867 SIGLEC15Q6ZMC9 328 aa20.43■□□□□ 0.86
SCARF1-207ENST00000573867 KIR2DL5AQ8N109 375 aa20.43■□□□□ 0.86
SCARF1-207ENST00000573867 KIR2DL5BQ8NHK3 375 aa20.43■□□□□ 0.86
SCARF1-207ENST00000573867 INMT-MINDY4F8WBC2 141 aa20.42■□□□□ 0.86
SCARF1-207ENST00000573867 DEFB135Q30KP9 77 aa20.42■□□□□ 0.86
SCARF1-207ENST00000573867 MARVELD1Q9BSK0 173 aa20.42■□□□□ 0.86
SCARF1-207ENST00000573867 STARD9Q9P2P6 4700 aa20.42■□□□□ 0.86
SCARF1-207ENST00000573867 CYP2G1PQ6ZSU1 146 aa20.41■□□□□ 0.86
SCARF1-207ENST00000573867 OR10P1Q8NGE3 313 aa20.41■□□□□ 0.86
SCARF1-207ENST00000573867 CSMD3Q7Z407 3707 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 C3orf84H3BNL1 204 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 L7N2F9 121 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 SIX6O95475 246 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 AP2S1P53680 142 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-207ENST00000573867 VAMP2P63027 116 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 RAB32Q13637 225 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 Q6ZWC4 215 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 GPN1Q9HCN4 374 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-207ENST00000573867 NRN1Q9NPD7 142 aa20.4■□□□□ 0.86
SCARF1-207ENST00000573867 FNDC10F2Z333 226 aa20.39■□□□□ 0.85
SCARF1-207ENST00000573867 UBE2CO00762 179 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms