RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 C11orf68Q9H3H3 251 aaKnown RBP12.7□□□□□ -0.38
SMG6-214ENST00000573827 CXorf65A6NEN9 183 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 HELTA6NFD8 242 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 KNCNA6PVL3 124 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 C4BPBP20851 252 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 VAMP1P23763 118 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 BTCP35070 178 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 ZNF90Q03938 601 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 OR51G1Q8NGK1 321 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 OR11H2Q8NH07 326 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 RARRES2Q99969 163 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 TMED3Q9Y3Q3 217 aa12.69□□□□□ -0.38
SMG6-214ENST00000573827 PIGBOS1A0A0B4J2F0 54 aa12.68□□□□□ -0.38
SMG6-214ENST00000573827 IFNA4P05014 189 aa12.68□□□□□ -0.38
SMG6-214ENST00000573827 IAPPP10997 89 aa12.68□□□□□ -0.38
SMG6-214ENST00000573827 UBE2MP61081 183 aaKnown RBP12.68□□□□□ -0.38
SMG6-214ENST00000573827 SPANXN2Q5MJ10 180 aa12.68□□□□□ -0.38
SMG6-214ENST00000573827 CENPSQ8N2Z9 138 aa12.68□□□□□ -0.38
SMG6-214ENST00000573827 RNF125Q96EQ8 232 aa12.68□□□□□ -0.38
SMG6-214ENST00000573827 NARS2Q96I59 477 aaKnown RBP12.68□□□□□ -0.38
SMG6-214ENST00000573827 DNAH2Q9P225 4427 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 NUPR2A6NF83 97 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 NDUFB6O95139 128 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 DHRS2Q13268 280 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 GGNBP1Q5YKI7 109 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 Q8NAQ8 132 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 CSNK1G2-AS1Q8NCQ2 148 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 SEPSECSQ9HD40 501 aaKnown RBP12.67□□□□□ -0.38
SMG6-214ENST00000573827 FLVCR2Q9UPI3 526 aa12.67□□□□□ -0.38
SMG6-214ENST00000573827 C9orf170A2RU37 121 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 HOXB5P09067 269 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 EIF2B2P49770 351 aaKnown RBP12.66□□□□□ -0.38
SMG6-214ENST00000573827 AP2S1P53680 142 aaPredicted RBP12.66□□□□□ -0.38
SMG6-214ENST00000573827 OR8G2PQ6IF36 304 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 SIGLEC15Q6ZMC9 328 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 STHQ8IWL8 128 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 TMEM217Q8N7C4 229 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 TRGV9Q99603 122 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 MAGT1Q9H0U3 335 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 HECTD4Q9Y4D8 3996 aa12.66□□□□□ -0.38
SMG6-214ENST00000573827 ZNF705EA8MWA4 302 aaPredicted RBP12.65□□□□□ -0.38
SMG6-214ENST00000573827 SYNGR2O43760 224 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 ADAP1O75689 374 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 SPP1P10451 314 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 PSMG4Q5JS54 123 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 ACTL10Q5JWF8 245 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 PHLDA1Q8WV24 401 aaPredicted RBP12.65□□□□□ -0.38
SMG6-214ENST00000573827 SLC35E1Q96K37 410 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 C17orf77Q96MU5 243 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 X6R8D5 127 aa12.65□□□□□ -0.38
SMG6-214ENST00000573827 DNAH17Q9UFH2 4485 aa12.64□□□□□ -0.39
SMG6-214ENST00000573827 NAP1L6A6NFF2 107 aa12.64□□□□□ -0.39
SMG6-214ENST00000573827 ZFP92A6NM28 416 aa12.64□□□□□ -0.39
SMG6-214ENST00000573827 SOCS3O14543 225 aa12.64□□□□□ -0.39
SMG6-214ENST00000573827 DEFB4AO15263 64 aa12.64□□□□□ -0.39
SMG6-214ENST00000573827 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
SMG6-214ENST00000573827 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
SMG6-214ENST00000573827 NANOS2P60321 138 aaKnown RBP12.64□□□□□ -0.39
SMG6-214ENST00000573827 ID3Q02535 119 aa12.64□□□□□ -0.39
SMG6-214ENST00000573827 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
SMG6-214ENST00000573827 MORN3Q6PF18 240 aaPredicted RBP12.64□□□□□ -0.39
SMG6-214ENST00000573827 WDR12Q9GZL7 423 aaKnown RBP12.64□□□□□ -0.39
SMG6-214ENST00000573827 MED6O75586 246 aa12.63□□□□□ -0.39
SMG6-214ENST00000573827 TMEM182Q6ZP80 229 aaPredicted RBP12.63□□□□□ -0.39
SMG6-214ENST00000573827 CIB3Q96Q77 187 aaPredicted RBP12.63□□□□□ -0.39
SMG6-214ENST00000573827 FAT2Q9NYQ8 4349 aa12.63□□□□□ -0.39
SMG6-214ENST00000573827 H3BMM0 161 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 WRBO00258 174 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 IL7P13232 177 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 DEFB1P60022 68 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 RAB11AP62491 216 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 OR2F1Q13607 317 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 C1orf194Q5T5A4 169 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 TRIQKQ629K1 86 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 OR4D5Q8NGN0 318 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 PBDC1Q9BVG4 233 aa12.62□□□□□ -0.39
SMG6-214ENST00000573827 IGHV4-28A0A0C4DH34 117 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 PMS2P5A8MQ11 134 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 SNRPGP15A8MWD9 76 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 PLA2G10O15496 165 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 OR4E1P0C645 316 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 ANXA7P20073 488 aaKnown RBP12.61□□□□□ -0.39
SMG6-214ENST00000573827 NUP62P37198 522 aaPredicted RBP12.61□□□□□ -0.39
SMG6-214ENST00000573827 POLR2GP62487 172 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMG6-214ENST00000573827 GSG1LQ6UXU4 331 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 C11orf45Q8TAV5 145 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 CLEC5AQ9NY25 188 aa12.61□□□□□ -0.39
SMG6-214ENST00000573827 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
SMG6-214ENST00000573827 H3BP45 60 aa12.6□□□□□ -0.39
SMG6-214ENST00000573827 HLA-DRB4P13762 266 aa12.6□□□□□ -0.39
SMG6-214ENST00000573827 NKX2-1P43699 371 aaPredicted RBP12.6□□□□□ -0.39
SMG6-214ENST00000573827 PAX9P55771 341 aa12.6□□□□□ -0.39
SMG6-214ENST00000573827 LYZP61626 148 aa12.6□□□□□ -0.39
SMG6-214ENST00000573827 SNRPD3P62318 126 aaKnown RBP12.6□□□□□ -0.39
SMG6-214ENST00000573827 GDF5OSQ5U4N7 250 aa12.6□□□□□ -0.39
SMG6-214ENST00000573827 HRH4Q9H3N8 390 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms