RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 KLF12Q9Y4X4 402 aa12.57□□□□□ -0.4
NUP88-207ENST00000573584 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 NBEAP1P0C6P0 100 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
NUP88-207ENST00000573584 ADIPOQQ15848 244 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 CCL17Q92583 94 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 NDUFB3O43676 98 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 ENSAO43768 121 aaKnown RBP12.56□□□□□ -0.4
NUP88-207ENST00000573584 NDUFB8O95169 186 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 CA7P43166 264 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 ETFRF1Q6IPR1 90 aa12.56□□□□□ -0.4
NUP88-207ENST00000573584 C2orf70A6NJV1 201 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 HBBP68871 147 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 IGFL3Q6UXB1 125 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 LYPD2Q6UXB3 125 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 LINC00322Q6ZN03 302 aaPredicted RBP12.55□□□□□ -0.4
NUP88-207ENST00000573584 WFDC8Q8IUA0 241 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 RPP21Q9H633 154 aaKnown RBP12.55□□□□□ -0.4
NUP88-207ENST00000573584 ROS1P08922 2347 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 LRRC10Q5BKY1 277 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 SMIM12Q96EX1 92 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 EP300Q09472 2414 aaPredicted RBP12.55□□□□□ -0.4
NUP88-207ENST00000573584 IGHV3-72A0A0B4J1Y9 119 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 TMEM178BH3BS89 294 aa12.55□□□□□ -0.4
NUP88-207ENST00000573584 HINT1P49773 126 aaPredicted RBP12.55□□□□□ -0.4
NUP88-207ENST00000573584 MRPS16Q9Y3D3 137 aaKnown RBP12.55□□□□□ -0.4
NUP88-207ENST00000573584 A8MWL6 223 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 H3BTX0 84 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 APELAP0DMC3 54 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 MC5RP33032 325 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 Q6ZS92 163 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 SSX8Q7RTT4 187 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 KIR3DL3Q8N743 410 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 ZNF596Q8TC21 504 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 IGHV3-21A0A0B4J1V1 117 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 IGLC7A0M8Q6 106 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 TCF21O43680 179 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 P01737 135 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 CRYGCP07315 174 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 FOXA3P55318 350 aaPredicted RBP12.54□□□□□ -0.4
NUP88-207ENST00000573584 MRGPRG-AS1Q2M3A8 158 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 C8orf31Q8N9H6 132 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 PLXNB1O43157 2135 aa12.54□□□□□ -0.4
NUP88-207ENST00000573584 MGAQ8IWI9 3026 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 TOMM40O96008 361 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 FAM87AP0C7U9 286 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 IGLL1P15814 213 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 LGALS7P47929 136 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 C5orf17Q8NAS9 161 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 URB1-AS1Q96HZ7 61 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 TRGV9Q99603 122 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 PRSS22Q9GZN4 317 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 CLEC5AQ9NY25 188 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 MAP1BP46821 2468 aaKnown RBP12.53□□□□□ -0.4
NUP88-207ENST00000573584 CD24P25063 80 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 PGLYRP4Q96LB8 373 aa12.53□□□□□ -0.4
NUP88-207ENST00000573584 CACNA1HO95180 2353 aa12.52□□□□□ -0.4
NUP88-207ENST00000573584 C20orf202A1L168 122 aa12.52□□□□□ -0.4
NUP88-207ENST00000573584 LTAP01374 205 aa12.52□□□□□ -0.4
NUP88-207ENST00000573584 DAZAP1Q96EP5 407 aaKnown RBP12.52□□□□□ -0.4
NUP88-207ENST00000573584 TMEM70Q9BUB7 260 aa12.52□□□□□ -0.4
NUP88-207ENST00000573584 ZNF835Q9Y2P0 537 aa12.52□□□□□ -0.4
NUP88-207ENST00000573584 CEP250Q9BV73 2442 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 IGHV2-26A0A0B4J1V2 119 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 SH2D7A6NKC9 451 aaPredicted RBP12.52□□□□□ -0.41
NUP88-207ENST00000573584 C16orf97H3BN30 126 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 M0QZ24 198 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 TCRAP04437 139 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 ZNF137PP52743 207 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 BSPH1Q075Z2 132 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 TMEM116Q8NCL8 245 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 FAM57AQ8TBR7 257 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 RBM14Q96PK6 669 aaKnown RBP12.52□□□□□ -0.41
NUP88-207ENST00000573584 Q9H3A6 140 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 DMXL1Q9Y485 3027 aa12.52□□□□□ -0.41
NUP88-207ENST00000573584 GP9P14770 177 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 FAM162BQ5T6X4 162 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 SPATA12Q7Z6I5 190 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 CTSZQ9UBR2 303 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 CNOT1A5YKK6 2376 aaKnown RBP12.51□□□□□ -0.41
NUP88-207ENST00000573584 C19orf71A6NCJ1 209 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 LOXP28300 417 aaPredicted RBP12.51□□□□□ -0.41
NUP88-207ENST00000573584 CT83Q5H943 113 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 K7EM74 188 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 TNFRSF13BO14836 293 aaPredicted RBP12.51□□□□□ -0.41
NUP88-207ENST00000573584 SFTPCP11686 197 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 RPL27AP46776 148 aaKnown RBP12.51□□□□□ -0.41
NUP88-207ENST00000573584 C8orf46Q8TAG6 207 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 ORAOV1Q8WV07 137 aa12.51□□□□□ -0.41
NUP88-207ENST00000573584 SOX21Q9Y651 276 aaPredicted RBP12.51□□□□□ -0.41
NUP88-207ENST00000573584 IGHV1-8P0DP01 117 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms