RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 SLC35E1Q96K37 410 aa15.18■□□□□ 0.02
CHRNB1-204ENST00000572857 FBXL17Q9UF56 701 aa15.18■□□□□ 0.02
CHRNB1-204ENST00000572857 BUB3O43684 328 aa15.17■□□□□ 0.02
CHRNB1-204ENST00000572857 PITX3O75364 302 aa15.17■□□□□ 0.02
CHRNB1-204ENST00000572857 GIG44P09565 113 aaPredicted RBP15.17■□□□□ 0.02
CHRNB1-204ENST00000572857 GPX4P36969 197 aaPredicted RBP15.17■□□□□ 0.02
CHRNB1-204ENST00000572857 PPP1R1AQ13522 171 aa15.17■□□□□ 0.02
CHRNB1-204ENST00000572857 RNF125Q96EQ8 232 aa15.17■□□□□ 0.02
CHRNB1-204ENST00000572857 RAB40CQ96S21 281 aa15.17■□□□□ 0.02
CHRNB1-204ENST00000572857 ALMS1Q8TCU4 4167 aa15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 HYDINQ4G0P3 5121 aa15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 SFT2D2O95562 160 aa15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 ZNF90Q03938 601 aa15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 SPANXN2Q5MJ10 180 aa15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 MORN3Q6PF18 240 aaPredicted RBP15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 SIGLEC15Q6ZMC9 328 aa15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 LRTM2Q8N967 370 aa15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 RBM38Q9H0Z9 239 aaKnown RBP15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 C11orf68Q9H3H3 251 aaKnown RBP15.16■□□□□ 0.02
CHRNB1-204ENST00000572857 HOXB5P09067 269 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 SPP1P10451 314 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 SNRPD3P62318 126 aaKnown RBP15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 RAB11AP62491 216 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 CENPSQ8N2Z9 138 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 DEDD2Q8WXF8 326 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 MFFQ9GZY8 342 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 MAGT1Q9H0U3 335 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 NRN1Q9NPD7 142 aa15.15■□□□□ 0.02
CHRNB1-204ENST00000572857 IGKV1D-37A0A075B6S9 117 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 FAM90A26D6RGX4 464 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 MED6O75586 246 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 SLC25A6P12236 298 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 C4BPBP20851 252 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 INPP1P49441 399 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 OR2F1Q13607 317 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 CLEC5AQ9NY25 188 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 PFDN2Q9UHV9 154 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 TMED3Q9Y3Q3 217 aa15.14■□□□□ 0.01
CHRNB1-204ENST00000572857 FABP1P07148 127 aa15.13■□□□□ 0.01
CHRNB1-204ENST00000572857 LYZP61626 148 aa15.13■□□□□ 0.01
CHRNB1-204ENST00000572857 TMEM41BQ5BJD5 291 aa15.13■□□□□ 0.01
CHRNB1-204ENST00000572857 SRRQ9GZT4 340 aa15.13■□□□□ 0.01
CHRNB1-204ENST00000572857 LINC00854A0A1B0GVQ3 168 aa15.12■□□□□ 0.01
CHRNB1-204ENST00000572857 SNRPGP15A8MWD9 76 aa15.12■□□□□ 0.01
CHRNB1-204ENST00000572857 WRBO00258 174 aa15.12■□□□□ 0.01
CHRNB1-204ENST00000572857 GGNBP1Q5YKI7 109 aa15.12■□□□□ 0.01
CHRNB1-204ENST00000572857 OR8G2PQ6IF36 304 aa15.12■□□□□ 0.01
CHRNB1-204ENST00000572857 AGRNO00468 2067 aa15.12■□□□□ 0.01
CHRNB1-204ENST00000572857 EPPK1P58107 5090 aaKnown RBP15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 IGHV4-28A0A0C4DH34 117 aa15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 ZNF701M0R085 212 aaPredicted RBP15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 SYNGR2O43760 224 aa15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 NUP62P37198 522 aaPredicted RBP15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 RPP30P78346 268 aaKnown RBP15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 BAK1Q16611 211 aa15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 TRIQKQ629K1 86 aa15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 Q8NAQ8 132 aa15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 PPP1R14BQ96C90 147 aa15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 CIB3Q96Q77 187 aaPredicted RBP15.11■□□□□ 0.01
CHRNB1-204ENST00000572857 RBMY1A1P0DJD3 496 aaKnown RBP15.1■□□□□ 0.01
CHRNB1-204ENST00000572857 RBMY1CP0DJD4 496 aa15.1■□□□□ 0.01
CHRNB1-204ENST00000572857 RBMY1FQ15415 496 aaKnown RBP15.1■□□□□ 0.01
CHRNB1-204ENST00000572857 TRGV9Q99603 122 aa15.1■□□□□ 0.01
CHRNB1-204ENST00000572857 SPANXN5Q5MJ07 72 aa15.09■□□□□ 0.01
CHRNB1-204ENST00000572857 GSG1LQ6UXU4 331 aa15.09■□□□□ 0.01
CHRNB1-204ENST00000572857 LINC00052Q96N35 136 aa15.09■□□□□ 0.01
CHRNB1-204ENST00000572857 SEPSECSQ9HD40 501 aaKnown RBP15.09■□□□□ 0.01
CHRNB1-204ENST00000572857 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
CHRNB1-204ENST00000572857 FLVCR2Q9UPI3 526 aa15.09■□□□□ 0.01
CHRNB1-204ENST00000572857 IGKV1OR2-108A0A075B7D4 117 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 C9orf170A2RU37 121 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 H3BMM0 161 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 H3BP45 60 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 ADAP1O75689 374 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 NDUFB6O95139 128 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 MIFP14174 115 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 NUTF2P61970 127 aaKnown RBP15.08■□□□□ 0
CHRNB1-204ENST00000572857 CSNK1G2-AS1Q8NCQ2 148 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 WDR12Q9GZL7 423 aaKnown RBP15.08■□□□□ 0
CHRNB1-204ENST00000572857 XCL2Q9UBD3 114 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 X6R8D5 127 aa15.08■□□□□ 0
CHRNB1-204ENST00000572857 NAP1L6A6NFF2 107 aa15.07■□□□□ 0
CHRNB1-204ENST00000572857 ZNF705EA8MWA4 302 aaPredicted RBP15.07■□□□□ 0
CHRNB1-204ENST00000572857 DEFB1P60022 68 aa15.07■□□□□ 0
CHRNB1-204ENST00000572857 UBE2MP61081 183 aaKnown RBP15.07■□□□□ 0
CHRNB1-204ENST00000572857 C1orf194Q5T5A4 169 aa15.07■□□□□ 0
CHRNB1-204ENST00000572857 OR8I2Q8N0Y5 310 aa15.07■□□□□ 0
CHRNB1-204ENST00000572857 THAP8Q8NA92 274 aa15.07■□□□□ 0
CHRNB1-204ENST00000572857 IGKV3-20P01619 116 aa15.06■□□□□ 0
CHRNB1-204ENST00000572857 ID1P41134 155 aa15.06■□□□□ 0
CHRNB1-204ENST00000572857 NKX2-1P43699 371 aaPredicted RBP15.06■□□□□ 0
CHRNB1-204ENST00000572857 C2CD4CQ8TF44 421 aa15.06■□□□□ 0
CHRNB1-204ENST00000572857 STRAPQ9Y3F4 350 aaKnown RBP15.06■□□□□ 0
CHRNB1-204ENST00000572857 PRSS46E5RG02 174 aa15.05■□□□□ -0
CHRNB1-204ENST00000572857 HLA-DRB4P13762 266 aa15.05■□□□□ -0
CHRNB1-204ENST00000572857 HLA-DMBP28068 263 aa15.05■□□□□ -0
CHRNB1-204ENST00000572857 POLR2GP62487 172 aaKnown RBP eCLIP15.05■□□□□ -0
CHRNB1-204ENST00000572857 AKR1C1Q04828 323 aa15.05■□□□□ -0
CHRNB1-204ENST00000572857 GDF5OSQ5U4N7 250 aa15.05■□□□□ -0
CHRNB1-204ENST00000572857 RPP25LQ8N5L8 163 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms