RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 OR51S1Q8NGJ8 323 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 OR4C16Q8NGL9 310 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 NDUFAF3Q9BU61 184 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 WDR12Q9GZL7 423 aaKnown RBP6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 GPR132Q9UNW8 380 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 BOLA1Q9Y3E2 137 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 DNAH2Q9P225 4427 aa6.17□□□□□ -1.42
CTDNEP1-203ENST00000570385 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 ZFP92A6NM28 416 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 F6UB75 175 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 AMBPP02760 352 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 AKAIN1P0CW23 69 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 SULT1A3P0DMM9 295 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 SULT1A4P0DMN0 295 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 HLA-DRB4P13762 266 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 HTN3P15516 51 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 AKR1C4P17516 323 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 LYZP61626 148 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 OR2F1Q13607 317 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 KLF9Q13886 244 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 IL18Q14116 193 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 SPCS2Q15005 226 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 NMSQ5H8A3 153 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 LYZL2Q7Z4W2 148 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 CLVS1Q8IUQ0 354 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 LGI3Q8N145 548 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 OR4B1Q8NGF8 309 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 C15orf40Q8WUR7 153 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 RNF125Q96EQ8 232 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 C1QTNF4Q9BXJ3 329 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 SLC35B3Q9H1N7 401 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 RBKSQ9H477 322 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 TMEM56-RWDD3S4R434 201 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 HLA-DRB4X5D2U9 266 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 HECTD4Q9Y4D8 3996 aa6.16□□□□□ -1.42
CTDNEP1-203ENST00000570385 RTL8CO15255 209 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 GSTZ1O43708 216 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 SPART-AS1P0CW21 52 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 P0DMU3 169 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 FAM231AP0DMU4 169 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 FAM231CP0DMU5 169 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 NKX2-1P43699 371 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 SURF2Q15527 256 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 ZNF705AQ6ZN79 300 aaPredicted RBP6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 LINC00336Q6ZUF6 198 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 UBE2DNLQ8IWF7 75 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 COQ8AQ8NI60 647 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 DTD1Q8TEA8 209 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 SMIM4Q8WVI0 70 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 PPP1R14BQ96C90 147 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 DIRAS2Q96HU8 199 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 MCUBQ9NWR8 336 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 PAIP2BQ9ULR5 123 aaKnown RBP6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 KCNIP3Q9Y2W7 256 aa6.15□□□□□ -1.42
CTDNEP1-203ENST00000570385 DYNC1H1Q14204 4646 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 DNAH11Q96DT5 4516 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 IGKV1D-37A0A075B6S9 117 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF705DP0CH99 300 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF705BP0CI00 300 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 IAPPP10997 89 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 ID1P41134 155 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 MRPS10P82664 201 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 SSBP1Q04837 148 aaKnown RBP6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 GAMTQ14353 236 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 SMCO1Q147U7 214 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 FAM222AQ5U5X8 452 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 NOXA1Q86UR1 476 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 ZNF709Q8N972 641 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 OR1S1Q8NH92 325 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 PRRT1Q99946 306 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 SAV1Q9H4B6 383 aaPredicted RBP6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 U3KQ87 197 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
CTDNEP1-203ENST00000570385 DNAH17Q9UFH2 4485 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 A0A0B4J2A0 478 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 SOCS3O14543 225 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 IFNA21P01568 189 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 PRM2P04554 102 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 CCR6P51684 374 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 SUPT4H1P63272 117 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 FAM78BQ5VT40 261 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 FOXI2Q6ZQN5 318 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 GPR141Q7Z602 305 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 OR8I2Q8N0Y5 310 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 C1orf158Q8N1D5 194 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 IL22RA2Q969J5 263 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 SLC35E1Q96K37 410 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 C20orf173Q96LM9 149 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 NEU1Q99519 415 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 C7orf50Q9BRJ6 194 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 NIPSNAP3BQ9BS92 247 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 SEPSECSQ9HD40 501 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 HSPB7Q9UBY9 170 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 SHPKQ9UHJ6 478 aa6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 YTHDF2Q9Y5A9 579 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-203ENST00000570385 RFNGQ9Y644 331 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms