RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ELOVL1Q9BW60 279 aa17.96■□□□□ 0.47
RAB40C-212ENST00000569575 SIGLEC8Q9NYZ4 499 aa17.96■□□□□ 0.47
RAB40C-212ENST00000569575 UBE2L5PA0A1B0GUS4 154 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 OVOL1O14753 267 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 AGPAT2O15120 278 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 PSG1P11464 419 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 BMI1P35226 326 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 RPL29P47914 159 aaKnown RBP17.95■□□□□ 0.46
RAB40C-212ENST00000569575 EIF5AP63241 154 aaKnown RBP17.95■□□□□ 0.46
RAB40C-212ENST00000569575 ZNF709Q8N972 641 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 OR9G4Q8NGQ1 327 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 DLX4Q92988 240 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-212ENST00000569575 DAZ1Q9NQZ3 744 aaKnown RBP17.95■□□□□ 0.46
RAB40C-212ENST00000569575 SLC45A2Q9UMX9 530 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 RNF24Q9Y225 148 aa17.95■□□□□ 0.46
RAB40C-212ENST00000569575 PUS1Q9Y606 427 aaKnown RBP eCLIP17.95■□□□□ 0.46
RAB40C-212ENST00000569575 FGF7P21781 194 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 SLURP1P55000 103 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 SYNJ2BPP57105 145 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 PLP1P60201 277 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 TOMM20LQ6UXN7 152 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 DUX3Q96PT4 197 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 ARPC5LQ9BPX5 153 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 GPR61Q9BZJ8 451 aa17.94■□□□□ 0.46
RAB40C-212ENST00000569575 KANTRA0A1W2PQU2 76 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 WI2-2373I1.2A0A1W2PRP0 233 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 ZNF320A2RRD8 509 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 YIF1AO95070 293 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 INSL3P51460 131 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 ZNF90Q03938 601 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 PRR31Q5SQ13 230 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 Q6ZRG5 221 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 MGST2Q99735 147 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 SMIM3Q9BZL3 60 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 MRPL27Q9P0M9 148 aaKnown RBP17.93■□□□□ 0.46
RAB40C-212ENST00000569575 TIMM9Q9Y5J7 89 aa17.93■□□□□ 0.46
RAB40C-212ENST00000569575 TSPAN15O95858 294 aa17.92■□□□□ 0.46
RAB40C-212ENST00000569575 EIF2B2P49770 351 aaKnown RBP17.92■□□□□ 0.46
RAB40C-212ENST00000569575 OPCMLQ14982 345 aa17.92■□□□□ 0.46
RAB40C-212ENST00000569575 PPP1R14BQ96C90 147 aa17.92■□□□□ 0.46
RAB40C-212ENST00000569575 RNF125Q96EQ8 232 aa17.92■□□□□ 0.46
RAB40C-212ENST00000569575 RCC1LQ96I51 464 aaKnown RBP17.92■□□□□ 0.46
RAB40C-212ENST00000569575 NARS2Q96I59 477 aaKnown RBP17.92■□□□□ 0.46
RAB40C-212ENST00000569575 NPCDR1Q9BY65 106 aa17.92■□□□□ 0.46
RAB40C-212ENST00000569575 ZFAND3Q9H8U3 227 aa17.92■□□□□ 0.46
RAB40C-212ENST00000569575 WNK1Q9H4A3 2382 aa17.92■□□□□ 0.46
RAB40C-212ENST00000569575 A0A1W2PS18 150 aa17.91■□□□□ 0.46
RAB40C-212ENST00000569575 CD5P06127 495 aa17.91■□□□□ 0.46
RAB40C-212ENST00000569575 CD33P20138 364 aa17.91■□□□□ 0.46
RAB40C-212ENST00000569575 GNPNAT1Q96EK6 184 aaPredicted RBP17.91■□□□□ 0.46
RAB40C-212ENST00000569575 METTL26Q96S19 204 aa17.91■□□□□ 0.46
RAB40C-212ENST00000569575 GGTLC1Q9BX51 225 aa17.91■□□□□ 0.46
RAB40C-212ENST00000569575 WFDC1Q9HC57 220 aa17.91■□□□□ 0.46
RAB40C-212ENST00000569575 ELOA3CA0A087WX78 387 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-212ENST00000569575 IL4P05112 153 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 C8orf88P0DMB2 117 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 CXCL2P19875 107 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 NPPCP23582 126 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 PRR20EP86478 221 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 PRR20CP86479 221 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 PRR20DP86480 221 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 PRR20BP86481 221 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 PRR20AP86496 221 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 TMUB2Q71RG4 321 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 ZNF414Q96IQ9 312 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 PSMG3Q9BT73 122 aaPredicted RBP17.9■□□□□ 0.46
RAB40C-212ENST00000569575 C20orf24Q9BUV8 137 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 ARL6Q9H0F7 186 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 TMEM231Q9H6L2 316 aa17.9■□□□□ 0.46
RAB40C-212ENST00000569575 IGHV3-35A0A0C4DH35 117 aa17.89■□□□□ 0.45
RAB40C-212ENST00000569575 BCL2L11O43521 198 aa17.89■□□□□ 0.45
RAB40C-212ENST00000569575 CRYBB3P26998 211 aa17.89■□□□□ 0.45
RAB40C-212ENST00000569575 LGALSLQ3ZCW2 172 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-212ENST00000569575 UNQ9165/PRO28630Q6UXU0 137 aa17.89■□□□□ 0.45
RAB40C-212ENST00000569575 PFDN5Q99471 154 aa17.89■□□□□ 0.45
RAB40C-212ENST00000569575 RABAC1Q9UI14 185 aa17.89■□□□□ 0.45
RAB40C-212ENST00000569575 LINC00869P0C866 280 aa17.88■□□□□ 0.45
RAB40C-212ENST00000569575 SERF2P84101 59 aa17.88■□□□□ 0.45
RAB40C-212ENST00000569575 CD300CQ08708 224 aa17.88■□□□□ 0.45
RAB40C-212ENST00000569575 OR1L4Q8NGR5 311 aa17.88■□□□□ 0.45
RAB40C-212ENST00000569575 SLC39A9Q9NUM3 307 aa17.88■□□□□ 0.45
RAB40C-212ENST00000569575 TECRQ9NZ01 308 aaKnown RBP17.88■□□□□ 0.45
RAB40C-212ENST00000569575 TMEM213A2RRL7 107 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 C2orf70A6NJV1 201 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 HNRNPCP07910 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
RAB40C-212ENST00000569575 CBLN1P23435 193 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 B2MP61769 119 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 C9orf66Q5T8R8 295 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 STPG3Q8N7X2 389 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 GRAMD2BQ96HH9 432 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 PXMP4Q9Y6I8 212 aa17.87■□□□□ 0.45
RAB40C-212ENST00000569575 HYPMO75409 117 aa17.86■□□□□ 0.45
RAB40C-212ENST00000569575 RPL7L1Q6DKI1 246 aaKnown RBP17.86■□□□□ 0.45
RAB40C-212ENST00000569575 OR2G3Q8NGZ4 309 aa17.86■□□□□ 0.45
RAB40C-212ENST00000569575 GATAD1Q8WUU5 269 aa17.86■□□□□ 0.45
RAB40C-212ENST00000569575 RNF2Q99496 336 aa17.86■□□□□ 0.45
RAB40C-212ENST00000569575 ARV1Q9H2C2 271 aa17.86■□□□□ 0.45
RAB40C-212ENST00000569575 CYTL1Q9NRR1 136 aa17.86■□□□□ 0.45
RAB40C-212ENST00000569575 SMPXQ9UHP9 88 aa17.86■□□□□ 0.45
RAB40C-212ENST00000569575 IGHV7-4-1A0A0J9YVY3 117 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms