RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, human

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH13-213	ENST00000569454	NPPC	P23582	126 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	PRTN3	P24158	256 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	COL8A2	P25067	703 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	PCP4	P48539	62 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	GNG4	P50150	75 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	TAS2R60	P59551	318 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	PLP1	P60201	277 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	PLGLA	Q15195	96 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	COA6	Q5JTJ3	125 aa	Known RBP	4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	TEX38	Q6PEX7	206 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	MIR17HG	Q75NE6	70 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	MOB3B	Q86TA1	216 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	OR10W1	Q8NGF6	305 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	OR10G8	Q8NGN5	311 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	CHRDL1	Q9BU40	450 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	PRORY	Q9H606	182 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	F11R	Q9Y624	299 aa	Known RBP	4.6	□□□□□ -1.67
CDH13-213	ENST00000569454	ARFGEF3	Q5TH69	2177 aa		4.6	□□□□□ -1.67
CDH13-213	ENST00000569454		A0A1W2PPQ1	181 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	HELT	A6NFD8	242 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	CGB1	A6NKQ9	187 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454		A6NNC1	897 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	C22orf46	C9J442	243 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	NBR2	O15453	112 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	NDUFA3	O95167	84 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	MOS	P00540	346 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	MT-ND6	P03923	174 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	COX7A1	P24310	79 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	S100A7	P31151	101 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	CNN1	P51911	297 aa	Known RBP	4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	EFNA4	P52798	201 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	DIAPH2-AS1	Q14236	149 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	MMD	Q15546	238 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	DOCK11	Q5JSL3	2073 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	ACTL10	Q5JWF8	245 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	C10orf55	Q5SWW7	151 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	SPATA31B1P	Q5VZV4	182 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	NPB	Q8NG41	125 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	OR5AU1	Q8NGC0	362 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	OR4X1	Q8NH49	305 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	SRSF12	Q8WXF0	261 aa	Known RBP	4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	NPIPB3	Q92617	1050 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	TMEM68	Q96MH6	324 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	ZNF48	Q96MX3	618 aa	Predicted RBP	4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	PAXX	Q9BUH6	204 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	OSTC	Q9NRP0	149 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	TNFRSF19	Q9NS68	423 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	IL36B	Q9NZH7	164 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	CDC42EP3	Q9UKI2	254 aa		4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	TBL2	Q9Y4P3	447 aa	Known RBP	4.59	□□□□□ -1.67
CDH13-213	ENST00000569454	CELSR2	Q9HCU4	2923 aa		4.59	□□□□□ -1.68
CDH13-213	ENST00000569454	DIDO1	Q9BTC0	2240 aa	Known RBP	4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TET2	Q6N021	2002 aa	Predicted RBP	4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TRBV20OR9-2	A0A075B6H5	130 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	IGKV1D-37	A0A075B6S9	117 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TRAV30	A0A087WSZ9	112 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	GGTLC3	B5MD39	225 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TEX22	C9J3V5	150 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	LYNX1	G3V0Z9	82 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	ISLR	O14498	428 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	PHOX2A	O14813	284 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TIMM23	O14925	209 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	HYPM	O75409	117 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	SOD3	P08294	240 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TRGC1	P0CF51	173 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	LYNX1	P0DP58	116 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	NDUFA6	P56556	154 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	MRGPRG-AS1	Q2M3A8	158 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	RPEL1	Q2QD12	228 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	CENPW	Q5EE01	88 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TMEM183A	Q8IXX5	376 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	HIST3H2BB	Q8N257	126 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	OR2T6	Q8NHC8	308 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	SGMS2	Q8NHU3	365 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	SPATA3	Q8NHX4	192 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	IGFBPL1	Q8WX77	278 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TMEM37	Q8WXS4	190 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	FRZB	Q92765	325 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	MISP3	Q96FF7	219 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	FAM167A-AS1	Q96KT0	104 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	RASL11B	Q9BPW5	248 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	DERL1	Q9BUN8	251 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	SLC25A2	Q9BXI2	301 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	OR51M1	Q9H341	326 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	TPSG1	Q9NRR2	321 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	ZNF355P	Q9NSJ1	428 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	C1RL	Q9NZP8	487 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	THYN1	Q9P016	225 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	PKDREJ	Q9NTG1	2253 aa		4.58	□□□□□ -1.68
CDH13-213	ENST00000569454	ICE1	Q9Y2F5	2266 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454	IGHV3-72	A0A0B4J1Y9	119 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454	NPIPB5	A8MRT5	1133 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454		E7EUB6	86 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454	PEX7	O00628	323 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454	CNIH1	O95406	144 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454	BRS3	P32247	399 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454	PDLIM4	P50479	330 aa		4.57	□□□□□ -1.68
CDH13-213	ENST00000569454	LGALS4	P56470	323 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms