RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 G3V3Q6 166 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 KCNAB3O43448 404 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 CCNKO75909 580 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 TSHBP01222 138 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 IAPPP10997 89 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 SLC25A6P12236 298 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 RPL27AP46776 148 aaKnown RBP6.14□□□□□ -1.43
CDH11-216ENST00000569128 HSPE1P61604 102 aaKnown RBP6.14□□□□□ -1.43
CDH11-216ENST00000569128 FXYD3Q14802 87 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 THOC7Q6I9Y2 204 aaKnown RBP6.14□□□□□ -1.43
CDH11-216ENST00000569128 RBMS3Q6XE24 437 aaKnown RBP6.14□□□□□ -1.43
CDH11-216ENST00000569128 C19orf35Q6ZS72 473 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 OR4A5Q8NH83 315 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 GRPEL2Q8TAA5 225 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 VSTM2AQ8TAG5 236 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 SPIN2AQ99865 258 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 SPIN2BQ9BPZ2 258 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 RNF126Q9BV68 326 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 LINC00527Q9UJ94 153 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 PITPNC1Q9UKF7 332 aa6.14□□□□□ -1.43
CDH11-216ENST00000569128 RCL1Q9Y2P8 373 aaKnown RBP6.14□□□□□ -1.43
CDH11-216ENST00000569128 LSM5Q9Y4Y9 91 aaKnown RBP6.14□□□□□ -1.43
CDH11-216ENST00000569128 CUBNO60494 3623 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 MTORP42345 2549 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 K7EPK0 472 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 FGF16O43320 207 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 CNIH1O95406 144 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 TMEM50AO95807 157 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 IFNA17P01571 189 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 HLA-DRB1P01911 266 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 REG1AP05451 166 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 GIPP09681 153 aaPredicted RBP6.13□□□□□ -1.43
CDH11-216ENST00000569128 TRAPPC2P0DI81 140 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 TRAPPC2BP0DI82 140 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 PAX9P55771 341 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 S100A10P60903 97 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 UBA52P62987 128 aaKnown RBP6.13□□□□□ -1.43
CDH11-216ENST00000569128 TNFRSF9Q07011 255 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 OR1L8Q8NGR8 309 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 ZNF418Q8TF45 676 aaPredicted RBP6.13□□□□□ -1.43
CDH11-216ENST00000569128 PPP1R1CQ8WVI7 109 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 SRSF12Q8WXF0 261 aaKnown RBP6.13□□□□□ -1.43
CDH11-216ENST00000569128 NOL4LQ96MY1 436 aaPredicted RBP6.13□□□□□ -1.43
CDH11-216ENST00000569128 CITED1Q99966 193 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 C1QTNF4Q9BXJ3 329 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 NMES1Q9C002 83 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 C11orf1Q9H5F2 150 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 PARP11Q9NR21 331 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 NDUFA4L2Q9NRX3 87 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 COA4Q9NYJ1 87 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 OR5AC2Q9NZP5 309 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 PRNDQ9UKY0 176 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 WSB1Q9Y6I7 421 aa6.13□□□□□ -1.43
CDH11-216ENST00000569128 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 CEBPZOSA8MTT3 80 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 G3V318 75 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 SYNGR2O43760 224 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 SSSCA1O60232 199 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 MPC2O95563 127 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 PSMB6P28072 239 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 VDAC2P45880 294 aaPredicted RBP6.12□□□□□ -1.43
CDH11-216ENST00000569128 HILS1P60008 231 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 SPCS3P61009 180 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 PRCDQ00LT1 54 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 WT1-ASQ06250 92 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 AKAP14Q86UN6 197 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 ZNF429Q86V71 674 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 TMEM86BQ8N661 226 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 OR2T35Q8NGX2 323 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 OR52E5Q8NH55 327 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 GATAD1Q8WUU5 269 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 COMMD5Q9GZQ3 224 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 ZNF702PQ9H963 129 aa6.12□□□□□ -1.43
CDH11-216ENST00000569128 PIGBOS1A0A0B4J2F0 54 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 IGLC7A0M8Q6 106 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 FAM24AA6NFZ4 105 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 H3BP45 60 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 IGHG2P01859 326 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 PRH1P02810 166 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 OR13C7P0DN81 318 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 MAS1LP35410 378 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 CYCSP99999 105 aaKnown RBP6.11□□□□□ -1.43
CDH11-216ENST00000569128 ECSCRQ19T08 205 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 C10orf99Q6UWK7 81 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 SLC35E3Q7Z769 313 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 LFNGQ8NES3 379 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 STXBP6Q8NFX7 210 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 OR5T1Q8NG75 326 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 OR5B3Q8NH48 314 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 DTD1Q8TEA8 209 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 ARPC1AQ92747 370 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 DLX4Q92988 240 aaPredicted RBP6.11□□□□□ -1.43
CDH11-216ENST00000569128 C2orf48Q96LS8 159 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 OR4C12Q96R67 309 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 NRN1Q9NPD7 142 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 FKBP11Q9NYL4 201 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 ZNF257Q9Y2Q1 563 aa6.11□□□□□ -1.43
CDH11-216ENST00000569128 NSD1Q96L73 2696 aaPredicted RBP6.1□□□□□ -1.43
CDH11-216ENST00000569128 TEP1Q99973 2627 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms