RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 CALYQ9NYX4 217 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 IDI2-AS1Q9NZ38 188 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
CDH3-208ENST00000569036 IGKV1-27A0A075B6S5 117 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 C3orf85A0A1B0GTC6 90 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 A0A1B0GU03 582 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 A0A1W2PP11 408 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 PPP5D1E7EU14 171 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 MPPED1O15442 326 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 OR2H2O95918 312 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 IFNA5P01569 189 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 CRIP2P52943 208 aaPredicted RBP8.33□□□□□ -1.08
CDH3-208ENST00000569036 SERF2P84101 59 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 ID3Q02535 119 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 SLC25A26Q70HW3 274 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 LYZL2Q7Z4W2 148 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 SAXO1Q8IYX7 474 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 TMEM252Q8N6L7 170 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 C18orf15Q96N68 181 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 RAB40CQ96S21 281 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 PYGO2Q9BRQ0 406 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 C20orf24Q9BUV8 137 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 RIMS4Q9H426 269 aaPredicted RBP8.33□□□□□ -1.08
CDH3-208ENST00000569036 PRR13Q9NZ81 148 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 FBXL7Q9UJT9 491 aa8.33□□□□□ -1.08
CDH3-208ENST00000569036 FAT1Q14517 4588 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 EPM2AB3EWF7 344 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 YIF1AO95070 293 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 BCL2P10415 239 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 FUT6P51993 359 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 LGALS9BQ3B8N2 356 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 ACOT6Q3I5F7 207 aaPredicted RBP8.32□□□□□ -1.08
CDH3-208ENST00000569036 SPIN3Q5JUX0 258 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 C6orf201Q7Z4U5 140 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 LINC00596Q86U02 117 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 Q8IYB0 196 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 CMTM1Q8IZ96 169 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 FAM58AQ8N1B3 248 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 TCTEX1D1Q8N7M0 179 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 PACRGQ96M98 296 aaPredicted RBP8.32□□□□□ -1.08
CDH3-208ENST00000569036 NDUFAF3Q9BU61 184 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 LINC00574Q9H8X3 128 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
CDH3-208ENST00000569036 IGSF23A1L1A6 192 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 TMEM250H0YL14 139 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 CYB5BO43169 146 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 PPYP01298 95 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 BCL3P20749 454 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 KIR2DS2P43631 304 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
CDH3-208ENST00000569036 NMSQ5H8A3 153 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 CYB561D1Q8N8Q1 229 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 OR10A7Q8NGE5 316 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 OR13A1Q8NGR1 328 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 RFESDQ8TAC1 157 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 C11orf45Q8TAV5 145 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 BORCS8Q96FH0 119 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 SH3BGRL3Q9H299 93 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 NAT8Q9UHE5 227 aa8.31□□□□□ -1.08
CDH3-208ENST00000569036 IGKV1D-8A0A087WSZ0 117 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 TRBV6-6A0A0A6YYG2 114 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 NPIPB11E5RHQ5 1161 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 SH2D1BO14796 132 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 PHOX2AO14813 284 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 CXCL1P09341 107 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 FUT3P21217 361 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 NHLH2Q02577 135 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 FAM90A2PQ658T7 463 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 CYP2G1PQ6ZSU1 146 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 OR52M1Q8NGK5 317 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 OR5C1Q8NGR4 320 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 LSM10Q969L4 123 aaKnown RBP8.3□□□□□ -1.08
CDH3-208ENST00000569036 ANAPC16Q96DE5 110 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 HIST1H2BLQ99880 126 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 SDF2L1Q9HCN8 221 aa8.3□□□□□ -1.08
CDH3-208ENST00000569036 GGCTO75223 188 aaKnown RBP8.29□□□□□ -1.08
CDH3-208ENST00000569036 TUSC2O75896 110 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 MBP02144 154 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 TRGV3P03979 118 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 TYMSP04818 313 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 RBMY1CP0DJD4 496 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 EGR2P11161 476 aaPredicted RBP8.29□□□□□ -1.08
CDH3-208ENST00000569036 SSTR5P35346 364 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 FHITP49789 147 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 MFAP2P55001 183 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 APOC4P55056 127 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 RBM11P57052 281 aaKnown RBP8.29□□□□□ -1.08
CDH3-208ENST00000569036 LINC00205P59089 165 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 HBG1P69891 147 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 HBG2P69892 147 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 ZNF124Q15973 351 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 C5orf64Q2M2E5 130 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 SELENOHQ8IZQ5 122 aaKnown RBP8.29□□□□□ -1.08
CDH3-208ENST00000569036 LINC00311Q8N616 119 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 POM121L12Q8N7R1 296 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms