RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 SFT2D2O95562 160 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 CA1P00915 261 aaPredicted RBP7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 HNRNPCP07910 306 aaKnown RBP eCLIP7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 DHRS2Q13268 280 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 OR2F1Q13607 317 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 AARDQ4LEZ3 155 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 TMEM128Q5BJH2 165 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 PVRIGQ6DKI7 326 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 NOXA1Q86UR1 476 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 PPP1R14BQ96C90 147 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 SRRQ9GZT4 340 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 VSIRQ9H7M9 311 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 HSPB7Q9UBY9 170 aa7.47□□□□□ -1.21
GTF3C1-206ENST00000566779 KNCNA6PVL3 124 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 H3BP45 60 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 JTBO76095 146 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 RD3LP0DJH9 198 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 CMC4P56277 68 aaPredicted RBP7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 LYZP61626 148 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 USF2Q15853 346 aaPredicted RBP7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 FAM90A2PQ658T7 463 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 STHQ8IWL8 128 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 OR51G1Q8NGK1 321 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 SLC25A21Q9BQT8 299 aaPredicted RBP7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 FLVCR2Q9UPI3 526 aa7.46□□□□□ -1.22
GTF3C1-206ENST00000566779 RYR3Q15413 4870 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 KIR2DL5BA0A0G2JN68 375 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 KIR2DL5BA0A0G2JPC4 375 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 SMCO3A2RU48 225 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 WRBO00258 174 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 UBE2CO00762 179 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 DEFB4AO15263 64 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 CD5P06127 495 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 EIF2B2P49770 351 aaKnown RBP7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 RAB11AP62491 216 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 EWSR1Q01844 656 aaKnown RBP eCLIP7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 BAK1Q16611 211 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 C4orf46Q504U0 113 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 PSMG4Q5JS54 123 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 ACTL10Q5JWF8 245 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 GGNBP1Q5YKI7 109 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 Q6ZWC4 215 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 KIR2DL5AQ8N109 375 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 RNF183Q96D59 192 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 CSTL1Q9H114 145 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 CACFD1Q9UGQ2 172 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 U3KQ87 197 aa7.45□□□□□ -1.22
GTF3C1-206ENST00000566779 PIGBOS1A0A0B4J2F0 54 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 DUXBA0A1W2PPF3 345 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 HELTA6NFD8 242 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 CENPXA8MT69 81 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 K7EQG2 157 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 ZNF701M0R085 212 aaPredicted RBP7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 MED6O75586 246 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 ADAP1O75689 374 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 TOMM40O96008 361 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 PSG1P11464 419 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 ANXA7P20073 488 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 CRYBB3P26998 211 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 YPEL3P61236 119 aaPredicted RBP7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 AKR1C1Q04828 323 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 SPANXN5Q5MJ07 72 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 GSG1LQ6UXU4 331 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 RNF125Q96EQ8 232 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 FBXL17Q9UF56 701 aa7.44□□□□□ -1.22
GTF3C1-206ENST00000566779 NAP1L6A6NFF2 107 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 SSSCA1O60232 199 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 NDUFB6O95139 128 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 UBE2MP61081 183 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 ZNF90Q03938 601 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 SIGLEC15Q6ZMC9 328 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 OR11H2Q8NH07 326 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 COQ8AQ8NI60 647 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 CIB3Q96Q77 187 aaPredicted RBP7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 RARRES2Q99969 163 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 CLEC5AQ9NY25 188 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 TMED3Q9Y3Q3 217 aa7.43□□□□□ -1.22
GTF3C1-206ENST00000566779 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 C9orf170A2RU37 121 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 SYNGR2O43760 224 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 IFNA21P01568 189 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 FABP1P07148 127 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 IL7P13232 177 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 SNRPD3P62318 126 aaKnown RBP7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 RPP30P78346 268 aaKnown RBP7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 GAMTQ14353 236 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 OR8G2PQ6IF36 304 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 C16orf54Q6UWD8 224 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 TMEM217Q8N7C4 229 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 LRTM2Q8N967 370 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 GLMPQ8WWB7 406 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 DEDD2Q8WXF8 326 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 LINC00052Q96N35 136 aa7.42□□□□□ -1.22
GTF3C1-206ENST00000566779 STARD9Q9P2P6 4700 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 FAM25EA8MYX2 175 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 FAM90A26D6RGX4 464 aa7.41□□□□□ -1.22
GTF3C1-206ENST00000566779 PITX3O75364 302 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms