RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TRIM63Q969Q1 353 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 SHPKQ9UHJ6 478 aa17.18■□□□□ 0.34
RAB40C-209ENST00000565511 HECTD4Q9Y4D8 3996 aa17.17■□□□□ 0.34
RAB40C-209ENST00000565511 RD3LP0DJH9 198 aa17.17■□□□□ 0.34
RAB40C-209ENST00000565511 KLF9Q13886 244 aaPredicted RBP17.17■□□□□ 0.34
RAB40C-209ENST00000565511 LGI3Q8N145 548 aa17.17■□□□□ 0.34
RAB40C-209ENST00000565511 KCNIP3Q9Y2W7 256 aa17.17■□□□□ 0.34
RAB40C-209ENST00000565511 IFNA4P05014 189 aa17.16■□□□□ 0.34
RAB40C-209ENST00000565511 ETFRF1Q6IPR1 90 aa17.16■□□□□ 0.34
RAB40C-209ENST00000565511 C2CD4CQ8TF44 421 aa17.16■□□□□ 0.34
RAB40C-209ENST00000565511 APLNQ9ULZ1 77 aa17.16■□□□□ 0.34
RAB40C-209ENST00000565511 CELA1Q9UNI1 258 aa17.16■□□□□ 0.34
RAB40C-209ENST00000565511 FABP12A6NFH5 140 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 HLA-DMBP28068 263 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 ZNF90Q03938 601 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 SIGLEC15Q6ZMC9 328 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 Q6ZTC4 211 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 MCFD2Q8NI22 146 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 HRH4Q9H3N8 390 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 NRN1Q9NPD7 142 aa17.15■□□□□ 0.34
RAB40C-209ENST00000565511 MIFP14174 115 aa17.14■□□□□ 0.33
RAB40C-209ENST00000565511 GAMTQ14353 236 aa17.14■□□□□ 0.33
RAB40C-209ENST00000565511 RNF125Q96EQ8 232 aa17.14■□□□□ 0.33
RAB40C-209ENST00000565511 U3KQ87 197 aa17.14■□□□□ 0.33
RAB40C-209ENST00000565511 V9GYH0 126 aa17.14■□□□□ 0.33
RAB40C-209ENST00000565511 PITX3O75364 302 aa17.13■□□□□ 0.33
RAB40C-209ENST00000565511 EIF2B2P49770 351 aaKnown RBP17.13■□□□□ 0.33
RAB40C-209ENST00000565511 TMEM41BQ5BJD5 291 aa17.13■□□□□ 0.33
RAB40C-209ENST00000565511 GDF5OSQ5U4N7 250 aa17.13■□□□□ 0.33
RAB40C-209ENST00000565511 NOXA1Q86UR1 476 aa17.13■□□□□ 0.33
RAB40C-209ENST00000565511 SCGB3A2Q96PL1 93 aa17.13■□□□□ 0.33
RAB40C-209ENST00000565511 PBDC1Q9BVG4 233 aa17.13■□□□□ 0.33
RAB40C-209ENST00000565511 WDR12Q9GZL7 423 aaKnown RBP17.13■□□□□ 0.33
RAB40C-209ENST00000565511 TBC1D24Q9ULP9 559 aa17.13■□□□□ 0.33
RAB40C-209ENST00000565511 IGLL5B9A064 214 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 H3BMM0 161 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 IAPPP10997 89 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 ZNF79Q15937 498 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 ZNF767PQ75MW2 155 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 TMED4Q7Z7H5 227 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 OR1S1Q8NH92 325 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 XCL2Q9UBD3 114 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 HERC2O95714 4834 aa17.12■□□□□ 0.33
RAB40C-209ENST00000565511 AP2S1P53680 142 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-209ENST00000565511 IGKV1OR2-108A0A075B7D4 117 aa17.1■□□□□ 0.33
RAB40C-209ENST00000565511 SRPXP78539 464 aa17.1■□□□□ 0.33
RAB40C-209ENST00000565511 SCRT1Q9BWW7 348 aa17.1■□□□□ 0.33
RAB40C-209ENST00000565511 CACFD1Q9UGQ2 172 aa17.1■□□□□ 0.33
RAB40C-209ENST00000565511 ZFP92A6NM28 416 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 SOCS3O14543 225 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 ANXA3P12429 323 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 HLA-DRB4P13762 266 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 GPX4P36969 197 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-209ENST00000565511 SNRPD3P62318 126 aaKnown RBP17.09■□□□□ 0.33
RAB40C-209ENST00000565511 OR2F1Q13607 317 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 PYDC2Q56P42 97 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 SLC35E1Q96K37 410 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 HLA-DRB4X5D2U9 266 aa17.09■□□□□ 0.33
RAB40C-209ENST00000565511 NOL3O60936 208 aaKnown RBP17.08■□□□□ 0.32
RAB40C-209ENST00000565511 FXYD7P58549 80 aa17.08■□□□□ 0.32
RAB40C-209ENST00000565511 LYZP61626 148 aa17.08■□□□□ 0.32
RAB40C-209ENST00000565511 C12orf74Q32Q52 190 aa17.08■□□□□ 0.32
RAB40C-209ENST00000565511 OR8G2PQ6IF36 304 aa17.08■□□□□ 0.32
RAB40C-209ENST00000565511 SEPSECSQ9HD40 501 aaKnown RBP17.08■□□□□ 0.32
RAB40C-209ENST00000565511 C11orf94C9JXX5 98 aa17.07■□□□□ 0.32
RAB40C-209ENST00000565511 IGKV3-20P01619 116 aa17.07■□□□□ 0.32
RAB40C-209ENST00000565511 LRTM2Q8N967 370 aa17.07■□□□□ 0.32
RAB40C-209ENST00000565511 DNAH17Q9UFH2 4485 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 DUXBA0A1W2PPF3 345 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 PRSS46E5RG02 174 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 VAMP1P23763 118 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 NKX2-1P43699 371 aaPredicted RBP17.06■□□□□ 0.32
RAB40C-209ENST00000565511 PPP1R1AQ13522 171 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 TMEM128Q5BJH2 165 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 TOMM5Q8N4H5 51 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 C17orf77Q96MU5 243 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 MAGT1Q9H0U3 335 aa17.06■□□□□ 0.32
RAB40C-209ENST00000565511 DNAH2Q9P225 4427 aa17.05■□□□□ 0.32
RAB40C-209ENST00000565511 IGHV4-4A0A075B6R2 117 aa17.05■□□□□ 0.32
RAB40C-209ENST00000565511 TRAV10A0A0B4J240 114 aa17.05■□□□□ 0.32
RAB40C-209ENST00000565511 TCTAP57738 103 aa17.05■□□□□ 0.32
RAB40C-209ENST00000565511 THAP8Q8NA92 274 aa17.05■□□□□ 0.32
RAB40C-209ENST00000565511 TRGV9Q99603 122 aa17.05■□□□□ 0.32
RAB40C-209ENST00000565511 PAIP2BQ9ULR5 123 aaKnown RBP17.05■□□□□ 0.32
RAB40C-209ENST00000565511 FAT2Q9NYQ8 4349 aa17.05■□□□□ 0.32
RAB40C-209ENST00000565511 SFT2D2O95562 160 aa17.04■□□□□ 0.32
RAB40C-209ENST00000565511 FAUP35544 74 aaKnown RBP17.04■□□□□ 0.32
RAB40C-209ENST00000565511 CCDC190Q86UF4 302 aa17.04■□□□□ 0.32
RAB40C-209ENST00000565511 ZNF709Q8N972 641 aa17.04■□□□□ 0.32
RAB40C-209ENST00000565511 LINC00052Q96N35 136 aa17.04■□□□□ 0.32
RAB40C-209ENST00000565511 SAV1Q9H4B6 383 aaPredicted RBP17.04■□□□□ 0.32
RAB40C-209ENST00000565511 F6UB75 175 aa17.03■□□□□ 0.32
RAB40C-209ENST00000565511 ATP5IP56385 69 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-209ENST00000565511 ZNF705AQ6ZN79 300 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-209ENST00000565511 TMEM182Q6ZP80 229 aaPredicted RBP17.03■□□□□ 0.32
RAB40C-209ENST00000565511 C20orf173Q96LM9 149 aa17.03■□□□□ 0.32
RAB40C-209ENST00000565511 HOXB5P09067 269 aa17.02■□□□□ 0.32
RAB40C-209ENST00000565511 SLC25A6P12236 298 aa17.02■□□□□ 0.32
RAB40C-209ENST00000565511 NUP62P37198 522 aaPredicted RBP17.02■□□□□ 0.32
RAB40C-209ENST00000565511 C1QTNF4Q9BXJ3 329 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1185 ms