RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 HBE1P02100 147 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 CD3DP04234 171 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 ALDH3B2P48448 385 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 GPR141Q7Z602 305 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 OR51G1Q8NGK1 321 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 NPIPB3Q92617 1050 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 KLK11Q9UBX7 282 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 TMED3Q9Y3Q3 217 aa11.19□□□□□ -0.62
HERPUD1-205ENST00000562914 ABCA13Q86UQ4 5058 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 PSG1P11464 419 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 ELK1P19419 428 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 ZNF709Q8N972 641 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 OR13C8Q8NGS7 320 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 COQ8AQ8NI60 647 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 RNF125Q96EQ8 232 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 ACY3Q96HD9 319 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 MTFP1Q9UDX5 166 aa11.18□□□□□ -0.62
HERPUD1-205ENST00000562914 PAX9P55771 341 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 PSG9Q00887 426 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 ZNF79Q15937 498 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 EBLN2Q6P2I7 272 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 MZT2AQ6P582 158 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 GLYATL2Q8WU03 294 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 LINC00052Q96N35 136 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 KRTAP4-5Q9BYR2 181 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 CACNG5Q9UF02 275 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 C14orf166Q9Y224 244 aaKnown RBP11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 U3KQ87 197 aa11.17□□□□□ -0.62
HERPUD1-205ENST00000562914 TEX13DA0A0J9YY54 714 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 C16orf90A8MZG2 172 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 ISLRO14498 428 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 HPGDSO60760 199 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 FABP1P07148 127 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 OR5AC1P0C628 307 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 HTN3P15516 51 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 ATP5IP56385 69 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 TAS2R19P59542 299 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 DAD1P61803 113 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 NCS1P62166 190 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 SUPT4H1P63272 117 aaKnown RBP11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 SURF2Q15527 256 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 NMSQ5H8A3 153 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 TMEM88Q6PEY1 159 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 GSG1LQ6UXU4 331 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 TMEM229BQ8NBD8 167 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 OR4B1Q8NGF8 309 aa11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 C7orf50Q9BRJ6 194 aaKnown RBP11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 YTHDF2Q9Y5A9 579 aaKnown RBP11.16□□□□□ -0.62
HERPUD1-205ENST00000562914 FAM25AB3EWG3 89 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 FAM25CB3EWG5 89 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 FAM25GB3EWG6 89 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 NXPH3O95157 252 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 GABARAPO95166 117 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 MEOX2P50222 304 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 RORCP51449 518 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 FXYD7P58549 80 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 VBP1P61758 197 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 KLF9Q13886 244 aaPredicted RBP11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 SCGB2B2Q4G0G5 96 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 GPR107Q5VW38 600 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 OR52I2Q8NH67 350 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 MARCH1Q8TCQ1 289 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 AP3S1Q92572 193 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 ATG101Q9BSB4 218 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 NAA60Q9H7X0 242 aa11.15□□□□□ -0.62
HERPUD1-205ENST00000562914 SOCS3O14543 225 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 RAB3DO95716 219 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 SSBP1Q04837 148 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 SELENOHQ8IZQ5 122 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 C1orf158Q8N1D5 194 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 IL22RA2Q969J5 263 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 GPR146Q96CH1 333 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 PBDC1Q9BVG4 233 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 WDR12Q9GZL7 423 aaKnown RBP11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 MAGT1Q9H0U3 335 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 SLC35B3Q9H1N7 401 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 RPRMQ9NS64 109 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 TMEM56-RWDD3S4R434 201 aa11.14□□□□□ -0.63
HERPUD1-205ENST00000562914 ZFP92A6NM28 416 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 LYRM9A8MSI8 78 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 SULT1A3P0DMM9 295 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 SULT1A4P0DMN0 295 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 GPX4P36969 197 aaPredicted RBP11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 B2MP61769 119 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 MEF2DQ14814 521 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 STEAP1BQ6NZ63 245 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 MAPKAPK5-AS1Q8N8E1 139 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 OR4D10Q8NGI6 311 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 LHFPL5Q8TAF8 219 aa11.13□□□□□ -0.63
HERPUD1-205ENST00000562914 A0A0J9YX75 114 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms