RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SMIM17P0DL12 118 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 MDKP21741 143 aaPredicted RBP6.19□□□□□ -1.42
TCF4-216ENST00000562680 PRSS8Q16651 343 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 C5orf64Q2M2E5 130 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 PVRIGQ6DKI7 326 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 OR2K2Q8NGT1 345 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 NPCDR1Q9BY65 106 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 PRSS22Q9GZN4 317 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 FNDC4Q9H6D8 234 aaPredicted RBP6.19□□□□□ -1.42
TCF4-216ENST00000562680 ZNF256Q9Y2P7 627 aaPredicted RBP6.19□□□□□ -1.42
TCF4-216ENST00000562680 C7orf71A4D174 169 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 TMEM250H0YL14 139 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 TFF1P04155 84 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 ANOS1P23352 680 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 PSG9Q00887 426 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 GAGE2BQ13066 116 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 GAGE2EQ4V326 116 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 C2orf83Q53S99 150 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 LINC01356Q8N9X3 169 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 NHLRC2Q8NBF2 726 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 SLC25A33Q9BSK2 321 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 GAGE2DQ9UEU5 116 aa6.19□□□□□ -1.42
TCF4-216ENST00000562680 BUB1B-PAK6H3BSN5 160 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 AREGP15514 252 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 FCER1GP30273 86 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 ADORA2A-AS1P86434 159 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 LY6EQ16553 131 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 ZNF506Q5JVG8 444 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 TEX38Q6PEX7 206 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 OR10G8Q8NGN5 311 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 DYNLRB2Q8TF09 96 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 BPESC1Q9GZL8 116 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 H0YJW9 148 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 J3QLI3 93 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 FAM157CP0CG43 387 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 CD69Q07108 199 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 NAT8BQ9UHF3 227 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 FNDC10F2Z333 226 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 WNT2P09544 360 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 OR9G9P0C7N8 305 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 APELAP0DMC3 54 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 LOXP28300 417 aaPredicted RBP6.18□□□□□ -1.42
TCF4-216ENST00000562680 BEX4Q9NWD9 120 aaPredicted RBP6.18□□□□□ -1.42
TCF4-216ENST00000562680 WDR83OSQ9Y284 106 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 MRPS16Q9Y3D3 137 aaKnown RBP6.18□□□□□ -1.42
TCF4-216ENST00000562680 FAM208BQ5VWN6 2430 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 GAGE12JA6NER3 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 GAGE7O76087 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 GAGE12FP0CL80 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 GAGE12GP0CL81 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 GAGE12IP0CL82 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 S100A4P26447 101 aaKnown RBP6.18□□□□□ -1.42
TCF4-216ENST00000562680 UBE2E1P51965 193 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 GAGE4Q13068 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 LYPD2Q6UXB3 125 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 C1orf43Q9BWL3 253 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 AKAP6Q13023 2319 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 NCOA6Q14686 2063 aaPredicted RBP6.18□□□□□ -1.42
TCF4-216ENST00000562680 IGKV1-6A0A0C4DH72 117 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 H0YIZ8 118 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 NPFFO15130 113 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 FGF16O43320 207 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 TRGV3P03979 118 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 CRYGCP07315 174 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 DLX6P56179 175 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 HS3ST6Q96QI5 342 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 FBXL7Q9UJT9 491 aa6.18□□□□□ -1.42
TCF4-216ENST00000562680 NCOR2Q9Y618 2525 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 IGKV1-5P01602 117 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 NPPCP23582 126 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 RPL30P62888 115 aaKnown RBP6.17□□□□□ -1.42
TCF4-216ENST00000562680 TCTEX1D4Q5JR98 221 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 ITLN2Q8WWU7 325 aaPredicted RBP6.17□□□□□ -1.42
TCF4-216ENST00000562680 DUX5Q96PT3 197 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 TRAV40A0A0B4J280 105 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 SMAD7O15105 426 aaKnown RBP6.17□□□□□ -1.42
TCF4-216ENST00000562680 SCGB1C2P0DMR2 95 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 LYL1P12980 280 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 SSBP2P81877 361 aaPredicted RBP6.17□□□□□ -1.42
TCF4-216ENST00000562680 C11orf53Q8IXP5 236 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 RPRMQ9NS64 109 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 PLCE1Q9P212 2302 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 A0A1B0GWB2 263 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 LHBP01229 141 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 RAB37Q96AX2 223 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 RNF125Q96EQ8 232 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 H3BUT2 72 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 SNAI2O43623 268 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 MT-ND6P03923 174 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 MSMBP08118 114 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 SEC11AP67812 179 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 KIAA2026Q5HYC2 2103 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 TMEM14EPQ6UXP3 125 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 OR4X2Q8NGF9 303 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 TMEM170AQ8WVE7 144 aa6.17□□□□□ -1.42
TCF4-216ENST00000562680 POLR3KQ9Y2Y1 108 aaPredicted RBP6.17□□□□□ -1.42
TCF4-216ENST00000562680 TSSC4Q9Y5U2 329 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms