RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 SLC35E1Q96K37 410 aa18.65■□□□□ 0.58
MSLN-203ENST00000561896 PFDN2Q9UHV9 154 aa18.65■□□□□ 0.58
MSLN-203ENST00000561896 NDUFB6O95139 128 aa18.64■□□□□ 0.57
MSLN-203ENST00000561896 FABP1P07148 127 aa18.64■□□□□ 0.57
MSLN-203ENST00000561896 RPP30P78346 268 aaKnown RBP18.64■□□□□ 0.57
MSLN-203ENST00000561896 TMEM41BQ5BJD5 291 aa18.64■□□□□ 0.57
MSLN-203ENST00000561896 OR8G2PQ6IF36 304 aa18.64■□□□□ 0.57
MSLN-203ENST00000561896 RNF125Q96EQ8 232 aa18.64■□□□□ 0.57
MSLN-203ENST00000561896 RARRES2Q99969 163 aa18.64■□□□□ 0.57
MSLN-203ENST00000561896 NUPR2A6NF83 97 aa18.63■□□□□ 0.57
MSLN-203ENST00000561896 ZFP92A6NM28 416 aa18.63■□□□□ 0.57
MSLN-203ENST00000561896 CA1P00915 261 aaPredicted RBP18.63■□□□□ 0.57
MSLN-203ENST00000561896 EWSR1Q01844 656 aaKnown RBP eCLIP18.63■□□□□ 0.57
MSLN-203ENST00000561896 PLECQ15149 4684 aaKnown RBP18.63■□□□□ 0.57
MSLN-203ENST00000561896 IGKV1D-37A0A075B6S9 117 aa18.62■□□□□ 0.57
MSLN-203ENST00000561896 SYNGR2O43760 224 aa18.62■□□□□ 0.57
MSLN-203ENST00000561896 ZNF688P0C7X2 276 aa18.62■□□□□ 0.57
MSLN-203ENST00000561896 DHRS2Q13268 280 aa18.62■□□□□ 0.57
MSLN-203ENST00000561896 TRPT1Q86TN4 253 aaKnown RBP18.62■□□□□ 0.57
MSLN-203ENST00000561896 C7orf50Q9BRJ6 194 aaKnown RBP18.62■□□□□ 0.57
MSLN-203ENST00000561896 NDUFA13Q9P0J0 144 aa18.62■□□□□ 0.57
MSLN-203ENST00000561896 ALMS1Q8TCU4 4167 aa18.62■□□□□ 0.57
MSLN-203ENST00000561896 C9orf170A2RU37 121 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 CXorf65A6NEN9 183 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 HOXB5P09067 269 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 SPP1P10451 314 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 IAPPP10997 89 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 GGNBP1Q5YKI7 109 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 MORN3Q6PF18 240 aaPredicted RBP18.61■□□□□ 0.57
MSLN-203ENST00000561896 SIGLEC15Q6ZMC9 328 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 TRGV9Q99603 122 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 SDHCQ99643 169 aaPredicted RBP18.61■□□□□ 0.57
MSLN-203ENST00000561896 C11orf68Q9H3H3 251 aaKnown RBP18.61■□□□□ 0.57
MSLN-203ENST00000561896 NRN1Q9NPD7 142 aa18.61■□□□□ 0.57
MSLN-203ENST00000561896 CENPXA8MT69 81 aa18.6■□□□□ 0.57
MSLN-203ENST00000561896 OR11H2Q8NH07 326 aa18.6■□□□□ 0.57
MSLN-203ENST00000561896 HYDINQ4G0P3 5121 aa18.59■□□□□ 0.57
MSLN-203ENST00000561896 SNRPGP15A8MWD9 76 aa18.59■□□□□ 0.57
MSLN-203ENST00000561896 SNRPD3P62318 126 aaKnown RBP18.59■□□□□ 0.57
MSLN-203ENST00000561896 CNPY1Q3B7I2 92 aa18.59■□□□□ 0.57
MSLN-203ENST00000561896 CEMP1Q6PRD7 247 aaPredicted RBP18.59■□□□□ 0.57
MSLN-203ENST00000561896 THAP8Q8NA92 274 aa18.59■□□□□ 0.57
MSLN-203ENST00000561896 COQ8AQ8NI60 647 aa18.59■□□□□ 0.57
MSLN-203ENST00000561896 CFDP00746 253 aaPredicted RBP18.58■□□□□ 0.56
MSLN-203ENST00000561896 ZNF90Q03938 601 aa18.58■□□□□ 0.56
MSLN-203ENST00000561896 PMS2P11Q13670 270 aa18.58■□□□□ 0.56
MSLN-203ENST00000561896 C1orf194Q5T5A4 169 aa18.58■□□□□ 0.56
MSLN-203ENST00000561896 PRSS46E5RG02 174 aa18.57■□□□□ 0.56
MSLN-203ENST00000561896 OR4E1P0C645 316 aa18.57■□□□□ 0.56
MSLN-203ENST00000561896 ID3Q02535 119 aa18.57■□□□□ 0.56
MSLN-203ENST00000561896 MAGT1Q9H0U3 335 aa18.57■□□□□ 0.56
MSLN-203ENST00000561896 FBXL17Q9UF56 701 aa18.57■□□□□ 0.56
MSLN-203ENST00000561896 WRBO00258 174 aa18.56■□□□□ 0.56
MSLN-203ENST00000561896 GIG44P09565 113 aaPredicted RBP18.56■□□□□ 0.56
MSLN-203ENST00000561896 BTCP35070 178 aa18.56■□□□□ 0.56
MSLN-203ENST00000561896 PSMG4Q5JS54 123 aa18.56■□□□□ 0.56
MSLN-203ENST00000561896 RAB40CQ96S21 281 aa18.56■□□□□ 0.56
MSLN-203ENST00000561896 PBDC1Q9BVG4 233 aa18.56■□□□□ 0.56
MSLN-203ENST00000561896 PAIP2BQ9ULR5 123 aaKnown RBP18.56■□□□□ 0.56
MSLN-203ENST00000561896 KLK5Q9Y337 293 aaPredicted RBP18.56■□□□□ 0.56
MSLN-203ENST00000561896 IGKV1OR2-108A0A075B7D4 117 aa18.55■□□□□ 0.56
MSLN-203ENST00000561896 KNCNA6PVL3 124 aa18.55■□□□□ 0.56
MSLN-203ENST00000561896 IFNA21P01568 189 aa18.55■□□□□ 0.56
MSLN-203ENST00000561896 IL7P13232 177 aa18.55■□□□□ 0.56
MSLN-203ENST00000561896 ACTL10Q5JWF8 245 aa18.55■□□□□ 0.56
MSLN-203ENST00000561896 MFFQ9GZY8 342 aa18.55■□□□□ 0.56
MSLN-203ENST00000561896 FLVCR2Q9UPI3 526 aa18.55■□□□□ 0.56
MSLN-203ENST00000561896 ADAP1O75689 374 aa18.54■□□□□ 0.56
MSLN-203ENST00000561896 STRAPQ9Y3F4 350 aaKnown RBP18.54■□□□□ 0.56
MSLN-203ENST00000561896 LYZP61626 148 aa18.53■□□□□ 0.56
MSLN-203ENST00000561896 SPANXN5Q5MJ07 72 aa18.53■□□□□ 0.56
MSLN-203ENST00000561896 SLC45A2Q9UMX9 530 aa18.53■□□□□ 0.56
MSLN-203ENST00000561896 LINC00854A0A1B0GVQ3 168 aa18.52■□□□□ 0.56
MSLN-203ENST00000561896 NKX2-1P43699 371 aaPredicted RBP18.52■□□□□ 0.56
MSLN-203ENST00000561896 C4orf46Q504U0 113 aa18.52■□□□□ 0.56
MSLN-203ENST00000561896 OR4D5Q8NGN0 318 aa18.52■□□□□ 0.56
MSLN-203ENST00000561896 C11orf45Q8TAV5 145 aa18.52■□□□□ 0.56
MSLN-203ENST00000561896 LINC00476Q8WZB0 136 aa18.52■□□□□ 0.56
MSLN-203ENST00000561896 ZNF705EA8MWA4 302 aaPredicted RBP18.51■□□□□ 0.55
MSLN-203ENST00000561896 C4BPBP20851 252 aa18.51■□□□□ 0.55
MSLN-203ENST00000561896 NUTF2P61970 127 aaKnown RBP18.51■□□□□ 0.55
MSLN-203ENST00000561896 SAMD13Q5VXD3 122 aa18.51■□□□□ 0.55
MSLN-203ENST00000561896 PHLDA1Q8WV24 401 aaPredicted RBP18.51■□□□□ 0.55
MSLN-203ENST00000561896 MIFP14174 115 aa18.5■□□□□ 0.55
MSLN-203ENST00000561896 ANXA7P20073 488 aaKnown RBP18.5■□□□□ 0.55
MSLN-203ENST00000561896 POLR2GP62487 172 aaKnown RBP eCLIP18.5■□□□□ 0.55
MSLN-203ENST00000561896 OR2F1Q13607 317 aa18.5■□□□□ 0.55
MSLN-203ENST00000561896 Q8NAQ8 132 aa18.5■□□□□ 0.55
MSLN-203ENST00000561896 CSNK1G2-AS1Q8NCQ2 148 aa18.5■□□□□ 0.55
MSLN-203ENST00000561896 SMIM8Q96KF7 97 aa18.5■□□□□ 0.55
MSLN-203ENST00000561896 C1QTNF4Q9BXJ3 329 aa18.5■□□□□ 0.55
MSLN-203ENST00000561896 H3BMM0 161 aa18.49■□□□□ 0.55
MSLN-203ENST00000561896 S100A7P31151 101 aa18.49■□□□□ 0.55
MSLN-203ENST00000561896 ID1P41134 155 aa18.49■□□□□ 0.55
MSLN-203ENST00000561896 PSMB3P49720 205 aa18.49■□□□□ 0.55
MSLN-203ENST00000561896 TMEM144Q7Z5S9 345 aa18.49■□□□□ 0.55
MSLN-203ENST00000561896 MITD1Q8WV92 249 aa18.49■□□□□ 0.55
MSLN-203ENST00000561896 HRH4Q9H3N8 390 aa18.49■□□□□ 0.55
MSLN-203ENST00000561896 H3BP45 60 aa18.48■□□□□ 0.55
MSLN-203ENST00000561896 HLA-DRB4P13762 266 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms