RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 ZNF124Q15973 351 aa15.23■□□□□ 0.03
TPM1-232ENST00000561425 C16orf54Q6UWD8 224 aa15.23■□□□□ 0.03
TPM1-232ENST00000561425 ACY3Q96HD9 319 aa15.23■□□□□ 0.03
TPM1-232ENST00000561425 CIB3Q96Q77 187 aaPredicted RBP15.23■□□□□ 0.03
TPM1-232ENST00000561425 GPN1Q9HCN4 374 aaPredicted RBP15.23■□□□□ 0.03
TPM1-232ENST00000561425 K7EQG2 157 aa15.22■□□□□ 0.03
TPM1-232ENST00000561425 HNRNPCP07910 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
TPM1-232ENST00000561425 PSG1P11464 419 aa15.22■□□□□ 0.03
TPM1-232ENST00000561425 FAM24BQ8N5W8 94 aa15.22■□□□□ 0.03
TPM1-232ENST00000561425 DCANP1Q8TF63 244 aa15.22■□□□□ 0.03
TPM1-232ENST00000561425 GLMPQ8WWB7 406 aa15.22■□□□□ 0.03
TPM1-232ENST00000561425 RNF183Q96D59 192 aa15.22■□□□□ 0.03
TPM1-232ENST00000561425 SEC22CQ9BRL7 303 aa15.22■□□□□ 0.03
TPM1-232ENST00000561425 MPTX1A8MV57 137 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 DNASE2O00115 360 aaPredicted RBP15.21■□□□□ 0.03
TPM1-232ENST00000561425 SPRY2O43597 315 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 BUB3O43684 328 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 ADAP1O75689 374 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 IAPPP10997 89 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 STPG3Q8N7X2 389 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 COQ8AQ8NI60 647 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 IL17DQ8TAD2 202 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 ZNF431Q8TF32 576 aaPredicted RBP15.21■□□□□ 0.03
TPM1-232ENST00000561425 GRAMD2BQ96HH9 432 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 NARS2Q96I59 477 aaKnown RBP15.21■□□□□ 0.03
TPM1-232ENST00000561425 RYR3Q15413 4870 aa15.21■□□□□ 0.03
TPM1-232ENST00000561425 IL4P05112 153 aa15.2■□□□□ 0.02
TPM1-232ENST00000561425 RPL35AP18077 110 aaKnown RBP15.2■□□□□ 0.02
TPM1-232ENST00000561425 RAB11AP62491 216 aa15.2■□□□□ 0.02
TPM1-232ENST00000561425 ZFAND6Q6FIF0 208 aa15.2■□□□□ 0.02
TPM1-232ENST00000561425 OR4D5Q8NGN0 318 aa15.2■□□□□ 0.02
TPM1-232ENST00000561425 MAGT1Q9H0U3 335 aa15.2■□□□□ 0.02
TPM1-232ENST00000561425 CSTL1Q9H114 145 aa15.2■□□□□ 0.02
TPM1-232ENST00000561425 DYNC2H1Q8NCM8 4307 aaKnown RBP15.2■□□□□ 0.02
TPM1-232ENST00000561425 CSMD3Q7Z407 3707 aa15.19■□□□□ 0.02
TPM1-232ENST00000561425 DEFB131AP59861 70 aa15.19■□□□□ 0.02
TPM1-232ENST00000561425 RPL11P62913 178 aaKnown RBP15.19■□□□□ 0.02
TPM1-232ENST00000561425 RPP30P78346 268 aaKnown RBP15.19■□□□□ 0.02
TPM1-232ENST00000561425 THAP8Q8NA92 274 aa15.19■□□□□ 0.02
TPM1-232ENST00000561425 OR51G1Q8NGK1 321 aa15.19■□□□□ 0.02
TPM1-232ENST00000561425 MITD1Q8WV92 249 aa15.19■□□□□ 0.02
TPM1-232ENST00000561425 SLC35E1Q96K37 410 aa15.19■□□□□ 0.02
TPM1-232ENST00000561425 TRGV9Q99603 122 aa15.19■□□□□ 0.02
TPM1-232ENST00000561425 IGKV1OR2-108A0A075B7D4 117 aa15.18■□□□□ 0.02
TPM1-232ENST00000561425 HELTA6NFD8 242 aa15.18■□□□□ 0.02
TPM1-232ENST00000561425 AP2S1P53680 142 aaPredicted RBP15.18■□□□□ 0.02
TPM1-232ENST00000561425 ZNF90Q03938 601 aa15.18■□□□□ 0.02
TPM1-232ENST00000561425 DEFB135Q30KP9 77 aa15.18■□□□□ 0.02
TPM1-232ENST00000561425 RNF125Q96EQ8 232 aa15.18■□□□□ 0.02
TPM1-232ENST00000561425 STARD9Q9P2P6 4700 aa15.18■□□□□ 0.02
TPM1-232ENST00000561425 SNRPGP15A8MWD9 76 aa15.17■□□□□ 0.02
TPM1-232ENST00000561425 WRBO00258 174 aa15.17■□□□□ 0.02
TPM1-232ENST00000561425 OR8G2PQ6IF36 304 aa15.17■□□□□ 0.02
TPM1-232ENST00000561425 SEPSECSQ9HD40 501 aaKnown RBP15.17■□□□□ 0.02
TPM1-232ENST00000561425 RABAC1Q9UI14 185 aa15.17■□□□□ 0.02
TPM1-232ENST00000561425 ZFP92A6NM28 416 aa15.16■□□□□ 0.02
TPM1-232ENST00000561425 IFNA21P01568 189 aa15.16■□□□□ 0.02
TPM1-232ENST00000561425 ATF4P18848 351 aaPredicted RBP15.16■□□□□ 0.02
TPM1-232ENST00000561425 EIF2B2P49770 351 aaKnown RBP15.16■□□□□ 0.02
TPM1-232ENST00000561425 C12orf45Q8N5I9 185 aaPredicted RBP15.16■□□□□ 0.02
TPM1-232ENST00000561425 STXBP6Q8NFX7 210 aa15.16■□□□□ 0.02
TPM1-232ENST00000561425 ALG5Q9Y673 324 aa15.16■□□□□ 0.02
TPM1-232ENST00000561425 C7orf66A4D0T2 115 aa15.15■□□□□ 0.02
TPM1-232ENST00000561425 PMS2P5A8MQ11 134 aa15.15■□□□□ 0.02
TPM1-232ENST00000561425 NKX2-1P43699 371 aaPredicted RBP15.15■□□□□ 0.02
TPM1-232ENST00000561425 PAX9P55771 341 aa15.15■□□□□ 0.02
TPM1-232ENST00000561425 POLR2GP62487 172 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM1-232ENST00000561425 SPANXN5Q5MJ07 72 aa15.15■□□□□ 0.02
TPM1-232ENST00000561425 LEMD1Q68G75 181 aa15.15■□□□□ 0.02
TPM1-232ENST00000561425 SMIM8Q96KF7 97 aa15.15■□□□□ 0.02
TPM1-232ENST00000561425 FABP1P07148 127 aa15.14■□□□□ 0.01
TPM1-232ENST00000561425 GATAD1Q8WUU5 269 aa15.14■□□□□ 0.01
TPM1-232ENST00000561425 STRAPQ9Y3F4 350 aaKnown RBP15.14■□□□□ 0.01
TPM1-232ENST00000561425 SSNA1O43805 119 aa15.13■□□□□ 0.01
TPM1-232ENST00000561425 CFDP00746 253 aaPredicted RBP15.13■□□□□ 0.01
TPM1-232ENST00000561425 NUP62P37198 522 aaPredicted RBP15.13■□□□□ 0.01
TPM1-232ENST00000561425 C1orf194Q5T5A4 169 aa15.13■□□□□ 0.01
TPM1-232ENST00000561425 SIGLEC15Q6ZMC9 328 aa15.13■□□□□ 0.01
TPM1-232ENST00000561425 TRPT1Q86TN4 253 aaKnown RBP15.13■□□□□ 0.01
TPM1-232ENST00000561425 A0A0J9YWU9 116 aa15.12■□□□□ 0.01
TPM1-232ENST00000561425 LCE6AA0A183 80 aa15.12■□□□□ 0.01
TPM1-232ENST00000561425 GIG44P09565 113 aaPredicted RBP15.12■□□□□ 0.01
TPM1-232ENST00000561425 ZNF688P0C7X2 276 aa15.12■□□□□ 0.01
TPM1-232ENST00000561425 EWSR1Q01844 656 aaKnown RBP eCLIP15.12■□□□□ 0.01
TPM1-232ENST00000561425 NRN1Q9NPD7 142 aa15.12■□□□□ 0.01
TPM1-232ENST00000561425 PFDN2Q9UHV9 154 aa15.12■□□□□ 0.01
TPM1-232ENST00000561425 PAIP2BQ9ULR5 123 aaKnown RBP15.12■□□□□ 0.01
TPM1-232ENST00000561425 TENM2Q9NT68 2774 aa15.11■□□□□ 0.01
TPM1-232ENST00000561425 SACSQ9NZJ4 4579 aa15.11■□□□□ 0.01
TPM1-232ENST00000561425 TAS2R30P59541 319 aa15.11■□□□□ 0.01
TPM1-232ENST00000561425 IAH1Q2TAA2 248 aaPredicted RBP15.11■□□□□ 0.01
TPM1-232ENST00000561425 TMEM14EPQ6UXP3 125 aa15.11■□□□□ 0.01
TPM1-232ENST00000561425 TMEM144Q7Z5S9 345 aa15.11■□□□□ 0.01
TPM1-232ENST00000561425 ZBTB8BQ8NAP8 495 aaPredicted RBP15.11■□□□□ 0.01
TPM1-232ENST00000561425 PSENENQ9NZ42 101 aa15.11■□□□□ 0.01
TPM1-232ENST00000561425 H3BP45 60 aa15.1■□□□□ 0.01
TPM1-232ENST00000561425 TMEM182Q6ZP80 229 aaPredicted RBP15.1■□□□□ 0.01
TPM1-232ENST00000561425 STHQ8IWL8 128 aa15.1■□□□□ 0.01
TPM1-232ENST00000561425 RAB40CQ96S21 281 aa15.1■□□□□ 0.01
TPM1-232ENST00000561425 PBDC1Q9BVG4 233 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms