RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	IL18	Q14116	193 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	C12orf74	Q32Q52	190 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	NMS	Q5H8A3	153 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	OR51G1	Q8NGK1	321 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	DIRAS2	Q96HU8	199 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	PBDC1	Q9BVG4	233 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	SCRT1	Q9BWW7	348 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	TMEM56-RWDD3	S4R434	201 aa		13	□□□□□ -0.33
DCAF11-238	ENST00000561375	HECTD4	Q9Y4D8	3996 aa		12.99	□□□□□ -0.33
DCAF11-238	ENST00000561375	BUB3	O43684	328 aa		12.99	□□□□□ -0.33
DCAF11-238	ENST00000561375	IGKV3-20	P01619	116 aa		12.99	□□□□□ -0.33
DCAF11-238	ENST00000561375	PSG1	P11464	419 aa		12.99	□□□□□ -0.33
DCAF11-238	ENST00000561375	GSG1L	Q6UXU4	331 aa		12.99	□□□□□ -0.33
DCAF11-238	ENST00000561375	DEFB131B	A0A096LNP1	70 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375		H3BMM0	161 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	ZNF701	M0R085	212 aa	Predicted RBP	12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	GSTZ1	O43708	216 aa	Predicted RBP	12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	TNFSF8	P32971	234 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	FXYD7	P58549	80 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	NUTF2	P61970	127 aa	Known RBP	12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	GDF5OS	Q5U4N7	250 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	RNF125	Q96EQ8	232 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	PRRT1	Q99946	306 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	RNF126	Q9BV68	326 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	C1QTNF4	Q9BXJ3	329 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	RBKS	Q9H477	322 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	DNAH6	Q9C0G6	4158 aa		12.98	□□□□□ -0.33
DCAF11-238	ENST00000561375	HERC2	O95714	4834 aa		12.97	□□□□□ -0.33
DCAF11-238	ENST00000561375	NOXA1	Q86UR1	476 aa		12.97	□□□□□ -0.33
DCAF11-238	ENST00000561375	LGI3	Q8N145	548 aa		12.97	□□□□□ -0.33
DCAF11-238	ENST00000561375	DTD1	Q8TEA8	209 aa		12.97	□□□□□ -0.33
DCAF11-238	ENST00000561375	IGHV3OR16-12	A0A075B7B8	117 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	AMBP	P02760	352 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	HLA-DRB4	P13762	266 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	AKR1C4	P17516	323 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	EMP1	P54849	157 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	SMCO1	Q147U7	214 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	LYZL2	Q7Z4W2	148 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	IL22RA2	Q969J5	263 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	MCUB	Q9NWR8	336 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	HSPB7	Q9UBY9	170 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	KCNIP3	Q9Y2W7	256 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	HLA-DRB4	X5D2U9	266 aa		12.96	□□□□□ -0.33
DCAF11-238	ENST00000561375	ANKRD20A5P	A0PJZ0	165 aa		12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	ZFP92	A6NM28	416 aa		12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	CTDSPL	O15194	276 aa		12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	CCR6	P51684	374 aa		12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	SUPT4H1	P63272	117 aa	Known RBP	12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	ZNF90	Q03938	601 aa		12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	KLF9	Q13886	244 aa	Predicted RBP	12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	LINC00052	Q96N35	136 aa		12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	WDR12	Q9GZL7	423 aa	Known RBP	12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375		U3KQ87	197 aa		12.95	□□□□□ -0.34
DCAF11-238	ENST00000561375	NKX2-1	P43699	371 aa	Predicted RBP	12.94	□□□□□ -0.34
DCAF11-238	ENST00000561375	LYZ	P61626	148 aa		12.94	□□□□□ -0.34
DCAF11-238	ENST00000561375	OR1S1	Q8NH92	325 aa		12.94	□□□□□ -0.34
DCAF11-238	ENST00000561375	SOST	Q9BQB4	213 aa		12.94	□□□□□ -0.34
DCAF11-238	ENST00000561375	SEPSECS	Q9HD40	501 aa	Known RBP	12.94	□□□□□ -0.34
DCAF11-238	ENST00000561375	SCP2D1	Q9UJQ7	156 aa		12.94	□□□□□ -0.34
DCAF11-238	ENST00000561375	IGKV1D-37	A0A075B6S9	117 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375		A0A0B4J2A0	478 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	FABP12	A6NFH5	140 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	OR2F1	Q13607	317 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	GAMT	Q14353	236 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	COQ8A	Q8NI60	647 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	SLC35E1	Q96K37	410 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	NDUFAF3	Q9BU61	184 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	NDUFA13	Q9P0J0	144 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	CACFD1	Q9UGQ2	172 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375	SHPK	Q9UHJ6	478 aa		12.93	□□□□□ -0.34
DCAF11-238	ENST00000561375		M0R2N4	97 aa		12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	IAPP	P10997	89 aa		12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	NUP62	P37198	522 aa	Predicted RBP	12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	OR8G2P	Q6IF36	304 aa		12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	OR4B1	Q8NGF8	309 aa		12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	PPP1R14B	Q96C90	147 aa		12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	RABL2B	Q9UNT1	228 aa		12.92	□□□□□ -0.34
DCAF11-238	ENST00000561375	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	ZNF705D	P0CH99	300 aa	Predicted RBP	12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	ZNF705B	P0CI00	300 aa	Predicted RBP	12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	S100A5	P33763	92 aa		12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	PSMB3	P49720	205 aa		12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	POM121L12	Q8N7R1	296 aa		12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	SCGB3A2	Q96PL1	93 aa		12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	SLC35B3	Q9H1N7	401 aa		12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	SAV1	Q9H4B6	383 aa	Predicted RBP	12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375	PAIP2B	Q9ULR5	123 aa	Known RBP	12.91	□□□□□ -0.34
DCAF11-238	ENST00000561375		F6UB75	175 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	SOCS3	O14543	225 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	SPART-AS1	P0CW21	52 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375		P0DMU3	169 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	FAM231A	P0DMU4	169 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	FAM231C	P0DMU5	169 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	ANXA3	P12429	323 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	ID1	P41134	155 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	FOXI2	Q6ZQN5	318 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	TMED4	Q7Z7H5	227 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	ZNF709	Q8N972	641 aa		12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms