RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 LYZL2Q7Z4W2 148 aa19.53■□□□□ 0.72
SNRPA1-215ENST00000561187 CENPSQ8N2Z9 138 aa19.53■□□□□ 0.72
SNRPA1-215ENST00000561187 DTD1Q8TEA8 209 aa19.53■□□□□ 0.72
SNRPA1-215ENST00000561187 ANKRD20A5PA0PJZ0 165 aa19.52■□□□□ 0.72
SNRPA1-215ENST00000561187 BUB3O43684 328 aa19.52■□□□□ 0.72
SNRPA1-215ENST00000561187 IGKV3-20P01619 116 aa19.52■□□□□ 0.72
SNRPA1-215ENST00000561187 TCTAP57738 103 aa19.52■□□□□ 0.72
SNRPA1-215ENST00000561187 FXYD7P58549 80 aa19.52■□□□□ 0.72
SNRPA1-215ENST00000561187 CTDSPLO15194 276 aa19.51■□□□□ 0.71
SNRPA1-215ENST00000561187 LGI3Q8N145 548 aa19.51■□□□□ 0.71
SNRPA1-215ENST00000561187 IL22RA2Q969J5 263 aa19.51■□□□□ 0.71
SNRPA1-215ENST00000561187 RNF125Q96EQ8 232 aa19.51■□□□□ 0.71
SNRPA1-215ENST00000561187 SCRT1Q9BWW7 348 aa19.51■□□□□ 0.71
SNRPA1-215ENST00000561187 KCNIP3Q9Y2W7 256 aa19.51■□□□□ 0.71
SNRPA1-215ENST00000561187 GSTZ1O43708 216 aaPredicted RBP19.5■□□□□ 0.71
SNRPA1-215ENST00000561187 SMCO1Q147U7 214 aa19.5■□□□□ 0.71
SNRPA1-215ENST00000561187 NOXA1Q86UR1 476 aa19.5■□□□□ 0.71
SNRPA1-215ENST00000561187 DYNC2LI1Q8TCX1 351 aa19.5■□□□□ 0.71
SNRPA1-215ENST00000561187 CCDC59Q9P031 241 aaKnown RBP19.5■□□□□ 0.71
SNRPA1-215ENST00000561187 HSPB7Q9UBY9 170 aa19.5■□□□□ 0.71
SNRPA1-215ENST00000561187 SCP2D1Q9UJQ7 156 aa19.5■□□□□ 0.71
SNRPA1-215ENST00000561187 ZFP92A6NM28 416 aa19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 H3BMM0 161 aa19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 CCR6P51684 374 aa19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 SUPT4H1P63272 117 aaKnown RBP19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 ZNF90Q03938 601 aa19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 GDF5OSQ5U4N7 250 aa19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 OR1S1Q8NH92 325 aa19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 KRTAP17-1Q9BYP8 105 aa19.49■□□□□ 0.71
SNRPA1-215ENST00000561187 A0A0B4J2A0 478 aa19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 LYZP61626 148 aa19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 NUTF2P61970 127 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 KLF9Q13886 244 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 C12orf74Q32Q52 190 aa19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 LINC00052Q96N35 136 aa19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 SHPKQ9UHJ6 478 aa19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 PAIP2BQ9ULR5 123 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 U3KQ87 197 aa19.48■□□□□ 0.71
SNRPA1-215ENST00000561187 IGHV3OR16-12A0A075B7B8 117 aa19.47■□□□□ 0.71
SNRPA1-215ENST00000561187 IAPPP10997 89 aa19.47■□□□□ 0.71
SNRPA1-215ENST00000561187 EMP1P54849 157 aa19.47■□□□□ 0.71
SNRPA1-215ENST00000561187 OR2F1Q13607 317 aa19.47■□□□□ 0.71
SNRPA1-215ENST00000561187 RAB2BQ8WUD1 216 aa19.47■□□□□ 0.71
SNRPA1-215ENST00000561187 SLC35E1Q96K37 410 aa19.47■□□□□ 0.71
SNRPA1-215ENST00000561187 WDR12Q9GZL7 423 aaKnown RBP19.47■□□□□ 0.71
SNRPA1-215ENST00000561187 DEFB131BA0A096LNP1 70 aa19.46■□□□□ 0.71
SNRPA1-215ENST00000561187 HLA-DRB4P13762 266 aa19.46■□□□□ 0.71
SNRPA1-215ENST00000561187 TMED4Q7Z7H5 227 aa19.46■□□□□ 0.71
SNRPA1-215ENST00000561187 C1QTNF4Q9BXJ3 329 aa19.46■□□□□ 0.71
SNRPA1-215ENST00000561187 HLA-DRB4X5D2U9 266 aa19.46■□□□□ 0.71
SNRPA1-215ENST00000561187 IGKV1D-37A0A075B6S9 117 aa19.45■□□□□ 0.7
SNRPA1-215ENST00000561187 GAMTQ14353 236 aa19.45■□□□□ 0.7
SNRPA1-215ENST00000561187 SCGB3A2Q96PL1 93 aa19.45■□□□□ 0.7
SNRPA1-215ENST00000561187 PPP1R14BQ96C90 147 aa19.44■□□□□ 0.7
SNRPA1-215ENST00000561187 CACFD1Q9UGQ2 172 aa19.44■□□□□ 0.7
SNRPA1-215ENST00000561187 RSL24D1Q9UHA3 163 aaKnown RBP19.44■□□□□ 0.7
SNRPA1-215ENST00000561187 ANXA3P12429 323 aa19.43■□□□□ 0.7
SNRPA1-215ENST00000561187 COQ8AQ8NI60 647 aa19.43■□□□□ 0.7
SNRPA1-215ENST00000561187 RNF126Q9BV68 326 aa19.43■□□□□ 0.7
SNRPA1-215ENST00000561187 RABL2AQ9UBK7 228 aaPredicted RBP19.43■□□□□ 0.7
SNRPA1-215ENST00000561187 RABL2BQ9UNT1 228 aa19.43■□□□□ 0.7
SNRPA1-215ENST00000561187 TNFSF8P32971 234 aa19.42■□□□□ 0.7
SNRPA1-215ENST00000561187 NKX2-1P43699 371 aaPredicted RBP19.42■□□□□ 0.7
SNRPA1-215ENST00000561187 OR4B1Q8NGF8 309 aa19.42■□□□□ 0.7
SNRPA1-215ENST00000561187 SLIRPQ9GZT3 109 aaKnown RBP19.42■□□□□ 0.7
SNRPA1-215ENST00000561187 FAT2Q9NYQ8 4349 aa19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 DNAH2Q9P225 4427 aa19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 FABP12A6NFH5 140 aa19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 NOL3O60936 208 aaKnown RBP19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 AMBPP02760 352 aa19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 NUP62P37198 522 aaPredicted RBP19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 SRPXP78539 464 aa19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 OR8G2PQ6IF36 304 aa19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 SEPSECSQ9HD40 501 aaKnown RBP19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 KIAA1109Q2LD37 5005 aa19.41■□□□□ 0.7
SNRPA1-215ENST00000561187 F6UB75 175 aa19.4■□□□□ 0.7
SNRPA1-215ENST00000561187 TMBIM6P55061 237 aa19.4■□□□□ 0.7
SNRPA1-215ENST00000561187 H3BMQ9 156 aa19.39■□□□□ 0.69
SNRPA1-215ENST00000561187 VAMP1P23763 118 aa19.39■□□□□ 0.69
SNRPA1-215ENST00000561187 MCFD2Q8NI22 146 aa19.39■□□□□ 0.69
SNRPA1-215ENST00000561187 SLC35B3Q9H1N7 401 aa19.39■□□□□ 0.69
SNRPA1-215ENST00000561187 SAV1Q9H4B6 383 aaPredicted RBP19.39■□□□□ 0.69
SNRPA1-215ENST00000561187 GPX4P36969 197 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-215ENST00000561187 ID1P41134 155 aa19.38■□□□□ 0.69
SNRPA1-215ENST00000561187 ZNF705AQ6ZN79 300 aaPredicted RBP19.38■□□□□ 0.69
SNRPA1-215ENST00000561187 FOXI2Q6ZQN5 318 aa19.38■□□□□ 0.69
SNRPA1-215ENST00000561187 MAGT1Q9H0U3 335 aa19.38■□□□□ 0.69
SNRPA1-215ENST00000561187 PFDN2Q9UHV9 154 aa19.38■□□□□ 0.69
SNRPA1-215ENST00000561187 M0R2N4 97 aa19.37■□□□□ 0.69
SNRPA1-215ENST00000561187 SOCS3O14543 225 aa19.37■□□□□ 0.69
SNRPA1-215ENST00000561187 PSMB3P49720 205 aa19.37■□□□□ 0.69
SNRPA1-215ENST00000561187 OR8I2Q8N0Y5 310 aa19.37■□□□□ 0.69
SNRPA1-215ENST00000561187 ZNF709Q8N972 641 aa19.37■□□□□ 0.69
SNRPA1-215ENST00000561187 SOSTQ9BQB4 213 aa19.37■□□□□ 0.69
SNRPA1-215ENST00000561187 NDUFAF3Q9BU61 184 aa19.37■□□□□ 0.69
SNRPA1-215ENST00000561187 IGKV1OR2-108A0A075B7D4 117 aa19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 ZNF705FA8MVS1 300 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 SNRPGP15A8MWD9 76 aa19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 ZNF705DP0CH99 300 aaPredicted RBP19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 ZNF705BP0CI00 300 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms