RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 IAPPP10997 89 aa11.81□□□□□ -0.52
LMX1B-204ENST00000561065 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
LMX1B-204ENST00000561065 OR51G1Q8NGK1 321 aa11.81□□□□□ -0.52
LMX1B-204ENST00000561065 RABAC1Q9UI14 185 aa11.81□□□□□ -0.52
LMX1B-204ENST00000561065 H2AFB2P0C5Z0 115 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 BTCP35070 178 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 GAMTQ14353 236 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 IAH1Q2TAA2 248 aaPredicted RBP11.8□□□□□ -0.52
LMX1B-204ENST00000561065 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 SPANXN5Q5MJ07 72 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 APRG1Q8IVJ8 170 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 LILRB2Q8N423 598 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 IL17DQ8TAD2 202 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 ST8SIA2Q92186 375 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 RAB40CQ96S21 281 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 MAGT1Q9H0U3 335 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 GSKIPQ9P0R6 139 aa11.8□□□□□ -0.52
LMX1B-204ENST00000561065 IGKV3-7A0A075B6H7 116 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 TRAV6A0A075B6T7 132 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 KIR2DL5BA0A0G2JN68 375 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 KIR2DL5BA0A0G2JPC4 375 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 ADAP1O75689 374 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 IL4P05112 153 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 TFPI2P48307 235 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 KIR2DL5AQ8N109 375 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 STPG3Q8N7X2 389 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 KIR2DL5BQ8NHK3 375 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 TMEM170AQ8WVE7 144 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 GPN1Q9HCN4 374 aaPredicted RBP11.79□□□□□ -0.52
LMX1B-204ENST00000561065 NUDT15Q9NV35 164 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 PSENENQ9NZ42 101 aa11.79□□□□□ -0.52
LMX1B-204ENST00000561065 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 PSG1P11464 419 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 RPL35AP18077 110 aaKnown RBP11.78□□□□□ -0.52
LMX1B-204ENST00000561065 P2RY1P47900 373 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 TAS2R30P59541 319 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 DEFA1P59665 94 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 DEFA3P59666 94 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 OR8G2PQ6IF36 304 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 GBGT1Q8N5D6 347 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 ENKURQ8TC29 256 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 ZNF431Q8TF32 576 aaPredicted RBP11.78□□□□□ -0.52
LMX1B-204ENST00000561065 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 MS4A6AQ9H2W1 248 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 MAP6D1Q9H9H5 199 aa11.78□□□□□ -0.52
LMX1B-204ENST00000561065 ASAH1Q13510 395 aa11.77□□□□□ -0.53
LMX1B-204ENST00000561065 Q6ZWC4 215 aa11.77□□□□□ -0.53
LMX1B-204ENST00000561065 WFDC3Q8IUB2 231 aa11.77□□□□□ -0.53
LMX1B-204ENST00000561065 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.53
LMX1B-204ENST00000561065 FAM24BQ8N5W8 94 aa11.77□□□□□ -0.53
LMX1B-204ENST00000561065 TRGV9Q99603 122 aa11.77□□□□□ -0.53
LMX1B-204ENST00000561065 FBXL17Q9UF56 701 aa11.77□□□□□ -0.53
LMX1B-204ENST00000561065 TP53TG1Q9Y2A0 90 aa11.77□□□□□ -0.53
LMX1B-204ENST00000561065 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 C5orf51A6NDU8 294 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 L7N2F9 121 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 UPK1BO75841 260 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 PVALBP20472 110 aaPredicted RBP11.76□□□□□ -0.53
LMX1B-204ENST00000561065 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
LMX1B-204ENST00000561065 VAMP2P63027 116 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 ZBTB8BQ8NAP8 495 aaPredicted RBP11.76□□□□□ -0.53
LMX1B-204ENST00000561065 STXBP6Q8NFX7 210 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 OR4D5Q8NGN0 318 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 PPP1R14BQ96C90 147 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 RNF125Q96EQ8 232 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 PBDC1Q9BVG4 233 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
LMX1B-204ENST00000561065 KMT2AQ03164 3969 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 FAM25EA8MYX2 175 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 SPRY2O43597 315 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 SSSCA1O60232 199 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
LMX1B-204ENST00000561065 AKR1C1Q04828 323 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 C1orf194Q5T5A4 169 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 BPIFCQ8NFQ6 507 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 SEPSECSQ9HD40 501 aaKnown RBP11.75□□□□□ -0.53
LMX1B-204ENST00000561065 U3KQE9 123 aa11.75□□□□□ -0.53
LMX1B-204ENST00000561065 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 TSC22D2O75157 780 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 IL5P05113 134 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 SAMD13Q5VXD3 122 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 C16orf54Q6UWD8 224 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 THAP8Q8NA92 274 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 RNF183Q96D59 192 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 CSTL1Q9H114 145 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 MGAT4CQ9UBM8 478 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 AGRNO00468 2067 aa11.74□□□□□ -0.53
LMX1B-204ENST00000561065 MPTX1A8MV57 137 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 BUB3O43684 328 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 SELENOTP62341 195 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 SIGLEC15Q6ZMC9 328 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 TMEM144Q7Z5S9 345 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 C2orf50Q96LR7 162 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
LMX1B-204ENST00000561065 NPVFQ9HCQ7 196 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms