RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 NDUFA5Q16718 116 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 PRSS54Q6PEW0 395 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 BTNL8Q6UX41 500 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 ZNF546Q86UE3 836 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 OR4D5Q8NGN0 318 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 OR10C1Q96KK4 312 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 TXN2Q99757 166 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 MFFQ9GZY8 342 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 MAGT1Q9H0U3 335 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 MBD2Q9UBB5 411 aa8.01□□□□□ -1.13
TPM1-227ENST00000560970 NUPR2A6NF83 97 aa8□□□□□ -1.13
TPM1-227ENST00000560970 FAM90A26D6RGX4 464 aa8□□□□□ -1.13
TPM1-227ENST00000560970 NUPL2O15504 423 aaKnown RBP8□□□□□ -1.13
TPM1-227ENST00000560970 TSC22D2O75157 780 aa8□□□□□ -1.13
TPM1-227ENST00000560970 IFNA10P01566 189 aa8□□□□□ -1.13
TPM1-227ENST00000560970 C8orf88P0DMB2 117 aa8□□□□□ -1.13
TPM1-227ENST00000560970 LRRC37A5PQ49AS3 106 aa8□□□□□ -1.13
TPM1-227ENST00000560970 ACOT7LQ6ZUV0 252 aa8□□□□□ -1.13
TPM1-227ENST00000560970 TMUB2Q71RG4 321 aa8□□□□□ -1.13
TPM1-227ENST00000560970 KCNRGQ8N5I3 272 aa8□□□□□ -1.13
TPM1-227ENST00000560970 INO80EQ8NBZ0 244 aaPredicted RBP8□□□□□ -1.13
TPM1-227ENST00000560970 OR4X1Q8NH49 305 aa8□□□□□ -1.13
TPM1-227ENST00000560970 RNASEH2CQ8TDP1 164 aaKnown RBP8□□□□□ -1.13
TPM1-227ENST00000560970 C20orf24Q9BUV8 137 aa8□□□□□ -1.13
TPM1-227ENST00000560970 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
TPM1-227ENST00000560970 CACFD1Q9UGQ2 172 aa8□□□□□ -1.13
TPM1-227ENST00000560970 UFC1Q9Y3C8 167 aa8□□□□□ -1.13
TPM1-227ENST00000560970 LOC102724200A0A096LPH7 203 aaPredicted RBP7.99□□□□□ -1.13
TPM1-227ENST00000560970 CXorf65A6NEN9 183 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 A6NJY4 79 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 SYNGR2O43760 224 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 CLN5O75503 358 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 TMEM50AO95807 157 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 IFNA7P01567 189 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 IGKV1-17P01599 117 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 NUP62P37198 522 aaPredicted RBP7.99□□□□□ -1.13
TPM1-227ENST00000560970 NPBWR1P48145 328 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 RND2P52198 227 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 ELLP55199 621 aaPredicted RBP7.99□□□□□ -1.13
TPM1-227ENST00000560970 POLR2GP62487 172 aaKnown RBP eCLIP7.99□□□□□ -1.13
TPM1-227ENST00000560970 RELQ04864 619 aaPredicted RBP7.99□□□□□ -1.13
TPM1-227ENST00000560970 PMS2P11Q13670 270 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 TIGITQ495A1 244 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 ARL6Q9H0F7 186 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 DAZ1Q9NQZ3 744 aaKnown RBP7.99□□□□□ -1.13
TPM1-227ENST00000560970 GSKIPQ9P0R6 139 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 U3KQ87 197 aa7.99□□□□□ -1.13
TPM1-227ENST00000560970 IGHV3-49A0A0A0MS15 119 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 RPS10-NUDT3A0A1W2PQS6 291 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 KANTRA0A1W2PQU2 76 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 RNF222A6NCQ9 220 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 H3BP45 60 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 WRBO00258 174 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 BCL2L11O43521 198 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 SCAF4O95104 1147 aaKnown RBP7.98□□□□□ -1.13
TPM1-227ENST00000560970 LY6G6CO95867 125 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 RLN2P04090 185 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 IGLC1P0CG04 106 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 S100A10P60903 97 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 ID3Q02535 119 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 RAB32Q13637 225 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 TEX261Q6UWH6 196 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 TOMM20LQ6UXN7 152 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 ZNF600Q6ZNG1 722 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 SLC51BQ86UW2 128 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 TMEM116Q8NCL8 245 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 AQP10Q96PS8 301 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 OVOL2Q9BRP0 275 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 RNF126Q9BV68 326 aa7.98□□□□□ -1.13
TPM1-227ENST00000560970 MRPL27Q9P0M9 148 aaKnown RBP7.98□□□□□ -1.13
TPM1-227ENST00000560970 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
TPM1-227ENST00000560970 PRSS46E5RG02 174 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 H0YIZ8 118 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 K7EMT4 169 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 SSSCA1O60232 199 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 MED6O75586 246 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 DEDDO75618 318 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 YIF1AO95070 293 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 SCGB1D2O95969 90 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 IFNA4P05014 189 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
TPM1-227ENST00000560970 APOC4P55056 127 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 ZNF680Q8NEM1 530 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 NPIPB3Q92617 1050 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 MARC2Q969Z3 335 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 ACY3Q96HD9 319 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 TP53TG1Q9Y2A0 90 aa7.97□□□□□ -1.13
TPM1-227ENST00000560970 RCL1Q9Y2P8 373 aaKnown RBP7.97□□□□□ -1.13
TPM1-227ENST00000560970 HECTD4Q9Y4D8 3996 aa7.96□□□□□ -1.13
TPM1-227ENST00000560970 IGKV1D-37A0A075B6S9 117 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 IGHV3OR16-13A0A075B7E8 117 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 IGHV3-74A0A0B4J1X5 117 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 TRAV25A0A0B4J276 109 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 IGHV7-4-1A0A0J9YVY3 117 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 A0A0J9YWU9 116 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 E5RGE8 158 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 K7EPK0 472 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 CHEK1O14757 476 aa7.96□□□□□ -1.14
TPM1-227ENST00000560970 MBPP02686 304 aaPredicted RBP7.96□□□□□ -1.14
TPM1-227ENST00000560970 APOHP02749 345 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms