RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 RNASE2P10153 161 aaKnown RBP12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 ETV6P41212 452 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 HOXA1P49639 335 aaPredicted RBP12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 FXYD7P58549 80 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 SPCS3P61009 180 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 DAD1P61803 113 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 DHODHQ02127 395 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 SP6Q3SY56 376 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 TIGITQ495A1 244 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 SCGB2B2Q4G0G5 96 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 C16orf54Q6UWD8 224 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 SPATA12Q7Z6I5 190 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 OR4D10Q8NGI6 311 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 GLMPQ8WWB7 406 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 C7orf50Q9BRJ6 194 aaKnown RBP12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 TMEM222Q9H0R3 208 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 MIXL1Q9H2W2 232 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
TSPAN3-208ENST00000560514 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 DISC1C4P0D8 188 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 CTDSP2O14595 271 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 HBE1P02100 147 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 BSXQ3C1V8 233 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 MARCH1Q8TCQ1 289 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 Q8WTZ3 238 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 GLYATL2Q8WU03 294 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 BCL7BQ9BQE9 202 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 RTBDNQ9BSG5 229 aaPredicted RBP12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 C14orf166Q9Y224 244 aaKnown RBP12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 GOLT1BQ9Y3E0 138 aa12.61□□□□□ -0.39
TSPAN3-208ENST00000560514 RGS5O15539 181 aa12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 HTR2BP41595 481 aa12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 NKX2-1P43699 371 aaPredicted RBP12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 SMIM4Q8WVI0 70 aa12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 GPR132Q9UNW8 380 aa12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 YTHDF2Q9Y5A9 579 aaKnown RBP12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 U3KQE9 123 aa12.6□□□□□ -0.39
TSPAN3-208ENST00000560514 LOC102723971A0A1B0GUV8 181 aa12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 MLANAQ16655 118 aa12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 SIGLEC15Q6ZMC9 328 aa12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 SCGB3A2Q96PL1 93 aa12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 NAA60Q9H7X0 242 aa12.59□□□□□ -0.39
TSPAN3-208ENST00000560514 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 EPM2AB3EWF7 344 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 GSTZ1O43708 216 aaPredicted RBP12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 IGKV1-17P01599 117 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 AKAIN1P0CW23 69 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 TMBIM6P55061 237 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 CCL18P55774 89 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 RRN3P1Q2M238 152 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 NOXA1Q86UR1 476 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 SELENOHQ8IZQ5 122 aaKnown RBP12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 OR4B1Q8NGF8 309 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 OR1S2Q8NGQ3 325 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 RAB2BQ8WUD1 216 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 DIRAS2Q96HU8 199 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 PRRT1Q99946 306 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 KCNIP3Q9Y2W7 256 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 TMEM56-RWDD3S4R434 201 aa12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 DMBT1Q9UGM3 2413 aaPredicted RBP12.58□□□□□ -0.4
TSPAN3-208ENST00000560514 A0A0G2JRQ6 117 aa12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 CRYM-AS1A6NIL9 109 aa12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 OR5AC1P0C628 307 aa12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 SPCS2Q15005 226 aa12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 C2orf83Q53S99 150 aa12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 RNASEH2CQ8TDP1 164 aaKnown RBP12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 IL22RA2Q969J5 263 aa12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 RSL24D1Q9UHA3 163 aaKnown RBP12.57□□□□□ -0.4
TSPAN3-208ENST00000560514 NUDT3O95989 172 aa12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 SLC25A4P12235 298 aa12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 ID1P41134 155 aa12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 GDF5OSQ5U4N7 250 aa12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 TMEM208Q9BTX3 173 aa12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 MAGT1Q9H0U3 335 aa12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 HEYLQ9NQ87 328 aaPredicted RBP12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 CCDC59Q9P031 241 aaKnown RBP12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 DNAH5Q8TE73 4624 aa12.56□□□□□ -0.4
TSPAN3-208ENST00000560514 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 ANKRD20A5PA0PJZ0 165 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 IL4P05112 153 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 OR10J1P30954 320 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 YPEL3P61236 119 aaPredicted RBP12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 IL18Q14116 193 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 ETFRF1Q6IPR1 90 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 DYNC2LI1Q8TCX1 351 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 GPR146Q96CH1 333 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
TSPAN3-208ENST00000560514 SCP2D1Q9UJQ7 156 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms