RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 OR5AN1Q8NGI8 311 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 FBLN5Q9UBX5 448 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 SRCAPQ6ZRS2 3230 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 BPESC1Q9GZL8 116 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 ATP5LO75964 103 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 PRCDQ00LT1 54 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 SCGB3A1Q96QR1 104 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 C3orf36Q3SXR2 165 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 SP5Q6BEB4 398 aaPredicted RBP11.14□□□□□ -0.63
TRAF3-208ENST00000560371 NABP1Q96AH0 204 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 OTORQ9NRC9 128 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 LEPP41159 167 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 LINC01356Q8N9X3 169 aa11.14□□□□□ -0.63
TRAF3-208ENST00000560371 H3BRM9 83 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 LYPD3O95274 346 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 CMC4P56277 68 aaPredicted RBP11.13□□□□□ -0.63
TRAF3-208ENST00000560371 OR10W1Q8NGF6 305 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 RPP21Q9H633 154 aaKnown RBP11.13□□□□□ -0.63
TRAF3-208ENST00000560371 OR11H12B2RN74 326 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 ZNF688P0C7X2 276 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 NAT1P18440 290 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 HIGD1CA8MV81 97 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 SLC17A3O00476 420 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 MLNRO43193 412 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 LILRA1O75019 489 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 LY6HO94772 140 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 NHLRC3Q5JS37 347 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 OOSP1A8MZH6 123 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 CD33P20138 364 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 SIGLEC15Q6ZMC9 328 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 ORMDL3Q8N138 153 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 ZNF525Q8N782 197 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 JKAMPQ9P055 326 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 ERVH48-1M5A8F1 160 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
TRAF3-208ENST00000560371 M0R1W7 72 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 FAM89BQ8N5H3 189 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 SLC25A16P16260 332 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 TEX38Q6PEX7 206 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 CNTFRP26992 372 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 ATP5G3P48201 142 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 TPTE2P1Q5T6R2 138 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 PSCAO43653 123 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 UQCR10Q9UDW1 63 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 HIVEP3Q5T1R4 2406 aa11.12□□□□□ -0.63
TRAF3-208ENST00000560371 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 IGHG3P01860 377 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 GAS1P54826 345 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 C18orf12Q96KH6 178 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 PSPNO60542 156 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 OR10J3Q5JRS4 329 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 TMEM42Q69YG0 159 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 MBNL3Q9NUK0 354 aaKnown RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 A0A087WV48 116 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 RBMY1A1P0DJD3 496 aaKnown RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 RBMY1CP0DJD4 496 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 ZNF474Q6S9Z5 364 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 FAM90A9PA6NNJ1 464 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 MRPL16Q9NX20 251 aaKnown RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 HOXA3O43365 443 aaPredicted RBP11.11□□□□□ -0.63
TRAF3-208ENST00000560371 ATOH7Q8N100 152 aa11.11□□□□□ -0.63
TRAF3-208ENST00000560371 CRPP02741 224 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 SLC25A48Q6ZT89 311 aaKnown RBP11.1□□□□□ -0.63
TRAF3-208ENST00000560371 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 A0A1B0GW15 77 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 APOHP02749 345 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-208ENST00000560371 IGKV1-12A0A0C4DH73 117 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 IGKV1D-12P01611 117 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 PRR30Q53SZ7 412 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-208ENST00000560371 CD5P06127 495 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 LCNL1Q6ZST4 164 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 J3QRE1 110 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 RNF114Q9Y508 228 aa11.1□□□□□ -0.63
TRAF3-208ENST00000560371 A0A0A6YYD4 124 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 TRBV7-1A0A0A6YYK4 115 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 RNF223E7ERA6 249 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 TDGF1P3P51864 188 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 SPSB3Q6PJ21 355 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 WFDC12Q8WWY7 111 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 VCX2Q9H322 139 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 DPRXA6NFQ7 191 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 TMEM50AO95807 157 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 E7EQL1 145 aa11.09□□□□□ -0.63
TRAF3-208ENST00000560371 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms