RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TMEM56Q96MV1 263 aa9.06□□□□□ -0.96
RABGGTA-213ENST00000560127 NEU1Q99519 415 aa9.06□□□□□ -0.96
RABGGTA-213ENST00000560127 DKK2Q9UBU2 259 aa9.06□□□□□ -0.96
RABGGTA-213ENST00000560127 C14orf166Q9Y224 244 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-213ENST00000560127 TEX13DA0A0J9YY54 714 aaPredicted RBP9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 A0A1B0GU03 582 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 HTN3P15516 51 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 S100GP29377 79 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 CCR6P51684 374 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 AARDQ4LEZ3 155 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 SPINK9Q5DT21 86 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 ZNF600Q6ZNG1 722 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 NIPSNAP3BQ9BS92 247 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 TMEM231Q9H6L2 316 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 SCP2D1Q9UJQ7 156 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 PRNDQ9UKY0 176 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 TMEM56-RWDD3S4R434 201 aa9.05□□□□□ -0.96
RABGGTA-213ENST00000560127 TMEM189A5PLL7 270 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 ZNF705FA8MVS1 300 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 PLA2G10O15496 165 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 ZNF705DP0CH99 300 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 ZNF705BP0CI00 300 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 NPPCP23582 126 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 P2RY1P47900 373 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 PRCDQ00LT1 54 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 TRIM16LQ309B1 348 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 H2BFWTQ7Z2G1 175 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 ZNRF2Q8NHG8 242 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 PINX1Q96BK5 328 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 TMED3Q9Y3Q3 217 aa9.04□□□□□ -0.96
RABGGTA-213ENST00000560127 A0A1W2PS18 150 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 SNAPC5O75971 98 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 AKR1C2P52895 323 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 AP3S2P59780 193 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 DHODHQ02127 395 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 NMSQ5H8A3 153 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 PSMG4Q5JS54 123 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 SLC35G3Q8N808 338 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 ZNF114Q8NC26 417 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 DEDD2Q8WXF8 326 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 RBPMSQ93062 196 aaKnown RBP9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 GPR146Q96CH1 333 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 TSC22D3Q99576 134 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 FLVCR2Q9UPI3 526 aa9.03□□□□□ -0.96
RABGGTA-213ENST00000560127 LINC00854A0A1B0GVQ3 168 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 HELTA6NFD8 242 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 SMIM9A6NGZ8 99 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 H3BMM0 161 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 B3GALNT1O75752 331 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 AKR1C4P17516 323 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 CRYBB3P26998 211 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 FAUP35544 74 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 NPBWR1P48145 328 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 HSPE1P61604 102 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 NUTF2P61970 127 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 PPP1R1AQ13522 171 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 OXA1LQ15070 435 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 TMEM268Q5VZI3 342 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 TRIQKQ629K1 86 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 TMED4Q7Z7H5 227 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 OR4A16Q8NH70 328 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 FKBP11Q9NYL4 201 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 RFNGQ9Y644 331 aa9.02□□□□□ -0.97
RABGGTA-213ENST00000560127 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 INS-IGF2F8WCM5 200 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 NDUFB6O95139 128 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 TMEM50AO95807 157 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 DHRS2Q13268 280 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 LYZL2Q7Z4W2 148 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 C15orf53Q8NAA6 179 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 TMEM170AQ8WVE7 144 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 IL22RA2Q969J5 263 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 METTL26Q96S19 204 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 ATG101Q9BSB4 218 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 PTTG2Q9NZH5 202 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
RABGGTA-213ENST00000560127 IGHV3OR16-12A0A075B7B8 117 aa9□□□□□ -0.97
RABGGTA-213ENST00000560127 RNASE2P10153 161 aaKnown RBP9□□□□□ -0.97
RABGGTA-213ENST00000560127 IFITM3Q01628 133 aa9□□□□□ -0.97
RABGGTA-213ENST00000560127 BSXQ3C1V8 233 aa9□□□□□ -0.97
RABGGTA-213ENST00000560127 LINC00299Q6ZSB3 139 aa9□□□□□ -0.97
RABGGTA-213ENST00000560127 SLC25A21Q9BQT8 299 aaPredicted RBP9□□□□□ -0.97
RABGGTA-213ENST00000560127 MRPL36Q9P0J6 103 aaKnown RBP9□□□□□ -0.97
RABGGTA-213ENST00000560127 A0A0B4J2A0 478 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 NXPH3O95157 252 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 FXYD7P58549 80 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 FAM219AQ8IW50 185 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 LRTM2Q8N967 370 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 SCGB3A2Q96PL1 93 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 SHPKQ9UHJ6 478 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 U3KQE9 123 aa8.99□□□□□ -0.97
RABGGTA-213ENST00000560127 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 NAP1L6A6NFF2 107 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 FAM90A26D6RGX4 464 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 PITX3O75364 302 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 SFT2D2O95562 160 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms