RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TCF23Q7RTU1 214 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 DTD1Q8TEA8 209 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 CORO2AQ92828 525 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 GALMQ96C23 342 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 YPEL2Q96QA6 119 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 RNF2Q99496 336 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 GNB1LQ9BYB4 327 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 WNT10AQ9GZT5 417 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 SLC25A22Q9H936 323 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 HES4Q9HCC6 221 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 ZNF586Q9NXT0 402 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 IL36BQ9NZH7 164 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 TRAPPC2LQ9UL33 140 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 GOLT1BQ9Y3E0 138 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 KIAA2026Q5HYC2 2103 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 ODAMA1E959 279 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 A6NDX4 124 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 C17orf98A8MV24 154 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 ODF3BA8MYP8 253 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 STAG3L2P0CL84 134 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 STAG3L3P0CL85 134 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 CRISP2P16562 243 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 PRDX2P32119 198 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 KIR2DS2P43631 304 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 RPL31P62899 125 aaKnown RBP4.66□□□□□ -1.66
USP3-212ENST00000559276 BLCAPP62952 87 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 RAB31Q13636 194 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 TCTEX1D4Q5JR98 221 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 TPTE2P1Q5T6R2 138 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 FAM78BQ5VT40 261 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 OR8G2PQ6IF36 304 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 H2BFWTQ7Z2G1 175 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 BATF2Q8N1L9 274 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 NECAP1Q8NC96 275 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 OR5AU1Q8NGC0 362 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 OR10G8Q8NGN5 311 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 OR4C13Q8NGP0 309 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 IL1F10Q8WWZ1 152 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 TMEM190Q8WZ59 177 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 UHRF2Q96PU4 802 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 CITED2Q99967 270 aaPredicted RBP4.66□□□□□ -1.66
USP3-212ENST00000559276 TMEM208Q9BTX3 173 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 VAMP8Q9BV40 100 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 ELOVL1Q9BW60 279 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 RAB9BQ9NP90 201 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
USP3-212ENST00000559276 OR1A1Q9P1Q5 309 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 TCF19Q9Y242 345 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 NOTCH3Q9UM47 2321 aa4.66□□□□□ -1.66
USP3-212ENST00000559276 TRGV10A0A0A0MS01 117 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 ZNF705FA8MVS1 300 aaPredicted RBP4.65□□□□□ -1.67
USP3-212ENST00000559276 HSPB6O14558 160 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 NXPH3O95157 252 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 OR2H2O95918 312 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 OR5G3P0C626 314 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 ZNF705DP0CH99 300 aaPredicted RBP4.65□□□□□ -1.67
USP3-212ENST00000559276 ZNF705BP0CI00 300 aaPredicted RBP4.65□□□□□ -1.67
USP3-212ENST00000559276 ZNF25P17030 456 aaPredicted RBP4.65□□□□□ -1.67
USP3-212ENST00000559276 COX7A1P24310 79 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 BRS3P32247 399 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 CHRNA7P36544 502 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 RHOBP62745 196 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 GNB1P62873 340 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 HTD2P86397 168 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 NSUN5P1Q3KNT7 163 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 FAM162BQ5T6X4 162 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 C19orf35Q6ZS72 473 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 TMEM219Q86XT9 240 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 WFDC9Q8NEX5 89 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 OR11H6Q8NGC7 330 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 OR2D3Q8NGH3 330 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 OR5B3Q8NH48 314 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 OR2T6Q8NHC8 308 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 QTRT1Q9BXR0 403 aaKnown RBP4.65□□□□□ -1.67
USP3-212ENST00000559276 NPFFR1Q9GZQ6 430 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 FAM234AQ9H0X4 552 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 UQCR10Q9UDW1 63 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 SLC45A2Q9UMX9 530 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 ZFP30Q9Y2G7 519 aa4.65□□□□□ -1.67
USP3-212ENST00000559276 TRAV39A0A0B4J263 110 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 C15orf62A8K5M9 175 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 K7EIL1 84 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 ITGB1BP1O14713 200 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 NDUFB4O95168 129 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 HLA-DQA1P01909 254 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 IL6RP08887 468 aaPredicted RBP4.64□□□□□ -1.67
USP3-212ENST00000559276 NPPCP23582 126 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 ADMP35318 185 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 RPL29P47914 159 aaKnown RBP4.64□□□□□ -1.67
USP3-212ENST00000559276 LGALS4P56470 323 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 LOXL3P58215 753 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 ERVK-16P61578 105 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 ZNF90Q03938 601 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 PMCHL1Q16048 86 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 IZUMO4Q1ZYL8 232 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 RPEL1Q2QD12 228 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 SMIM21Q3B7S5 101 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 TMEM30BQ3MIR4 351 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 DMRTA1Q5VZB9 504 aa4.64□□□□□ -1.67
USP3-212ENST00000559276 CST9LP1Q5W188 147 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms