RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 LHFPL5Q8TAF8 219 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 PHLDA1Q8WV24 401 aaPredicted RBP5.37□□□□□ -1.55
SPG11-213ENST00000558988 DIRAS2Q96HU8 199 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 NARS2Q96I59 477 aaKnown RBP5.37□□□□□ -1.55
SPG11-213ENST00000558988 METTL26Q96S19 204 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 ATP6V0BQ99437 205 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 C1orf43Q9BWL3 253 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 MIXL1Q9H2W2 232 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 FNDC4Q9H6D8 234 aaPredicted RBP5.37□□□□□ -1.55
SPG11-213ENST00000558988 MCUBQ9NWR8 336 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 MDFICQ9P1T7 246 aa5.37□□□□□ -1.55
SPG11-213ENST00000558988 KLK5Q9Y337 293 aaPredicted RBP5.37□□□□□ -1.55
SPG11-213ENST00000558988 GABARAPH6UMI1 98 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 CORTO00230 105 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 CLN5O75503 358 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 DEDDO75618 318 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 CD74P04233 296 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 P0C879 139 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 UCP1P25874 307 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 P2RY1P47900 373 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 RND2P52198 227 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 CMC4P56277 68 aaPredicted RBP5.36□□□□□ -1.55
SPG11-213ENST00000558988 VAMP2P63027 116 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 RBMS2Q15434 407 aaKnown RBP5.36□□□□□ -1.55
SPG11-213ENST00000558988 FAM90A2PQ658T7 463 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 Q6ZTC4 211 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 STHQ8IWL8 128 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 OR51S1Q8NGJ8 323 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 OR4C16Q8NGL9 310 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 C11orf45Q8TAV5 145 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 C15orf40Q8WUR7 153 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 GPR146Q96CH1 333 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 ACY3Q96HD9 319 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 MRPS26Q9BYN8 205 aaKnown RBP5.36□□□□□ -1.55
SPG11-213ENST00000558988 TMEM222Q9H0R3 208 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 TMEM231Q9H6L2 316 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 NAA60Q9H7X0 242 aa5.36□□□□□ -1.55
SPG11-213ENST00000558988 SEPSECSQ9HD40 501 aaKnown RBP5.36□□□□□ -1.55
SPG11-213ENST00000558988 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.36□□□□□ -1.55
SPG11-213ENST00000558988 RPS10-NUDT3A0A1W2PQS6 291 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 A0A1W2PS18 150 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 NOL3O60936 208 aaKnown RBP5.35□□□□□ -1.55
SPG11-213ENST00000558988 IFNA10P01566 189 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 IFNA4P05014 189 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 AKAIN1P0CW23 69 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 AKR1C4P17516 323 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 OR10J1P30954 320 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 SPCS3P61009 180 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 DHRS2Q13268 280 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 TMEM187Q14656 261 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 PSMG4Q5JS54 123 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 ACTL10Q5JWF8 245 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 SELENOHQ8IZQ5 122 aaKnown RBP5.35□□□□□ -1.55
SPG11-213ENST00000558988 RPP25LQ8N5L8 163 aaKnown RBP5.35□□□□□ -1.55
SPG11-213ENST00000558988 SLC24A4Q8NFF2 622 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 OR4X1Q8NH49 305 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 GLYATL2Q8WU03 294 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 SMIM4Q8WVI0 70 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 RBPMSQ93062 196 aaKnown RBP5.35□□□□□ -1.55
SPG11-213ENST00000558988 GRAMD2BQ96HH9 432 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 RTBDNQ9BSG5 229 aaPredicted RBP5.35□□□□□ -1.55
SPG11-213ENST00000558988 VSIRQ9H7M9 311 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 CLEC5AQ9NY25 188 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 PAIP2BQ9ULR5 123 aaKnown RBP5.35□□□□□ -1.55
SPG11-213ENST00000558988 AGRNO00468 2067 aa5.35□□□□□ -1.55
SPG11-213ENST00000558988 CRYM-AS1A6NIL9 109 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 K7EQG2 157 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 CDS2O95674 445 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 IGKV1-17P01599 117 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 IL4P05112 153 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 CD5P06127 495 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 SULT1A3P0DMM9 295 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 SULT1A4P0DMN0 295 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 NPY1RP25929 384 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 HTR2BP41595 481 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 DHODHQ02127 395 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 PRSS54Q6PEW0 395 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 GSG1LQ6UXU4 331 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 TMED4Q7Z7H5 227 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 FAM219AQ8IW50 185 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 Q8WTZ3 238 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 GATAD1Q8WUU5 269 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 NPIPB3Q92617 1050 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 PBDC1Q9BVG4 233 aa5.34□□□□□ -1.55
SPG11-213ENST00000558988 TRAV30A0A087WSZ9 112 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 PGPEP1LA6NFU8 196 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 INS-IGF2F8WCM5 200 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 B3GALNT1O75752 331 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 IGKV3-20P01619 116 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 HNRNPCP07910 306 aaKnown RBP eCLIP5.33□□□□□ -1.56
SPG11-213ENST00000558988 IGLC1P0CG04 106 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 SLC25A4P12235 298 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 C4BPBP20851 252 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 RPL5P46777 297 aaKnown RBP5.33□□□□□ -1.56
SPG11-213ENST00000558988 ALDH3B2P48448 385 aa5.33□□□□□ -1.56
SPG11-213ENST00000558988 EIF2B2P49770 351 aaKnown RBP5.33□□□□□ -1.56
SPG11-213ENST00000558988 MRPS10P82664 201 aaKnown RBP5.33□□□□□ -1.56
SPG11-213ENST00000558988 SSBP1Q04837 148 aaKnown RBP5.33□□□□□ -1.56
SPG11-213ENST00000558988 USF2Q15853 346 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms