RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ALDH3B2P48448 385 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 RND2P52198 227 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 FAM3BP58499 235 aaPredicted RBP5.91□□□□□ -1.46
TRAF3-205ENST00000558700 TMEM187Q14656 261 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 SPCS2Q15005 226 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 TMEM41BQ5BJD5 291 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 TMEM268Q5VZI3 342 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 ETFRF1Q6IPR1 90 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 NOXA1Q86UR1 476 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 STHQ8IWL8 128 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 OR4C16Q8NGL9 310 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 OR1S2Q8NGQ3 325 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 LHFPL5Q8TAF8 219 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 RNASEH2CQ8TDP1 164 aaKnown RBP5.91□□□□□ -1.46
TRAF3-205ENST00000558700 GLYATL2Q8WU03 294 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 PHLDA1Q8WV24 401 aaPredicted RBP5.91□□□□□ -1.46
TRAF3-205ENST00000558700 IL22RA2Q969J5 263 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 TMEM230Q96A57 120 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 DIRAS2Q96HU8 199 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 BCL7BQ9BQE9 202 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 DNAH1Q9P2D7 4330 aa5.91□□□□□ -1.46
TRAF3-205ENST00000558700 PIGBOS1A0A0B4J2F0 54 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 HELTA6NFD8 242 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 K7EQG2 157 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 CTDSP2O14595 271 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 GSTZ1O43708 216 aaPredicted RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 IGKV1-17P01599 117 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 HNRNPCP07910 306 aaKnown RBP eCLIP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 IGLC1P0CG04 106 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 SULT1A3P0DMM9 295 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 SULT1A4P0DMN0 295 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 SPP1P10451 314 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 NPY1RP25929 384 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 CRYBB3P26998 211 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 OR10J1P30954 320 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 NUP62P37198 522 aaPredicted RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 SRPXP78539 464 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 RBMS2Q15434 407 aaKnown RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 TIGITQ495A1 244 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 C2orf83Q53S99 150 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 LEMD1Q68G75 181 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 MORN3Q6PF18 240 aaPredicted RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 CLVS1Q8IUQ0 354 aaPredicted RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 SELENOHQ8IZQ5 122 aaKnown RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 OR11H2Q8NH07 326 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 C11orf45Q8TAV5 145 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 SCGB3A2Q96PL1 93 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 RTBDNQ9BSG5 229 aaPredicted RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 MRPL36Q9P0J6 103 aaKnown RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 RSL24D1Q9UHA3 163 aaKnown RBP5.9□□□□□ -1.46
TRAF3-205ENST00000558700 SCP2D1Q9UJQ7 156 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 GPR132Q9UNW8 380 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 KCNIP3Q9Y2W7 256 aa5.9□□□□□ -1.46
TRAF3-205ENST00000558700 PLECQ15149 4684 aaKnown RBP5.9□□□□□ -1.47
TRAF3-205ENST00000558700 IFNA4P05014 189 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 ZNF688P0C7X2 276 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 FAUP35544 74 aaKnown RBP5.89□□□□□ -1.47
TRAF3-205ENST00000558700 TMBIM6P55061 237 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 YPEL3P61236 119 aaPredicted RBP5.89□□□□□ -1.47
TRAF3-205ENST00000558700 PRSS54Q6PEW0 395 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 TMEM88Q6PEY1 159 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 Q6ZRM9 215 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 TRPT1Q86TN4 253 aaKnown RBP5.89□□□□□ -1.47
TRAF3-205ENST00000558700 FAM24BQ8N5W8 94 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 OR51S1Q8NGJ8 323 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 Q8WTZ3 238 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 FBXL17Q9UF56 701 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 TMEM56-RWDD3S4R434 201 aa5.89□□□□□ -1.47
TRAF3-205ENST00000558700 EPPK1P58107 5090 aaKnown RBP5.89□□□□□ -1.47
TRAF3-205ENST00000558700 A0A0B4J2A0 478 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 ANKRD20A5PA0PJZ0 165 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 NXPH3O95157 252 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 TOMM40O96008 361 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 IL4P05112 153 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 ANXA3P12429 323 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 CCR6P51684 374 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 AP2S1P53680 142 aaPredicted RBP5.88□□□□□ -1.47
TRAF3-205ENST00000558700 NANOS2P60321 138 aaKnown RBP5.88□□□□□ -1.47
TRAF3-205ENST00000558700 SNRPD3P62318 126 aaKnown RBP5.88□□□□□ -1.47
TRAF3-205ENST00000558700 DHRS2Q13268 280 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 NMSQ5H8A3 153 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 CENPSQ8N2Z9 138 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 DYNC2LI1Q8TCX1 351 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 DCANP1Q8TF63 244 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 GLMPQ8WWB7 406 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 GPR146Q96CH1 333 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 ACY3Q96HD9 319 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 MCUBQ9NWR8 336 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 MGAT4CQ9UBM8 478 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 SHPKQ9UHJ6 478 aa5.88□□□□□ -1.47
TRAF3-205ENST00000558700 KNCNA6PVL3 124 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 IFNA10P01566 189 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 FABP1P07148 127 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 MIFP14174 115 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 C4BPBP20851 252 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 TCTAP57738 103 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 AP3S2P59780 193 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 SMCO1Q147U7 214 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 USF2Q15853 346 aaPredicted RBP5.87□□□□□ -1.47
TRAF3-205ENST00000558700 PSMG4Q5JS54 123 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms