RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 GSTZ1O43708 216 aaPredicted RBP11.26□□□□□ -0.61
TPM1-211ENST00000558314 PSG1P11464 419 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 ANXA3P12429 323 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 CCR6P51684 374 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 FXYD7P58549 80 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 NUTF2P61970 127 aaKnown RBP11.26□□□□□ -0.61
TPM1-211ENST00000558314 KLF9Q13886 244 aaPredicted RBP11.26□□□□□ -0.61
TPM1-211ENST00000558314 NMSQ5H8A3 153 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 DYNC2LI1Q8TCX1 351 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 RAB2BQ8WUD1 216 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 PPP1R14BQ96C90 147 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 SLC35E1Q96K37 410 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 LINC00052Q96N35 136 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 NRN1Q9NPD7 142 aa11.26□□□□□ -0.61
TPM1-211ENST00000558314 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
TPM1-211ENST00000558314 IGHV3OR16-12A0A075B7B8 117 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 TRAV10A0A0B4J240 114 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 FABP12A6NFH5 140 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 IAPPP10997 89 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 EMP1P54849 157 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 DEFB1P60022 68 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 LYZP61626 148 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 OR2F1Q13607 317 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 RNF125Q96EQ8 232 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 RABL2AQ9UBK7 228 aaPredicted RBP11.25□□□□□ -0.61
TPM1-211ENST00000558314 APLNQ9ULZ1 77 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 CELA1Q9UNI1 258 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 RABL2BQ9UNT1 228 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 U3KQ87 197 aa11.25□□□□□ -0.61
TPM1-211ENST00000558314 A0A0B4J2A0 478 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
TPM1-211ENST00000558314 BUB3O43684 328 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 ZNF90Q03938 601 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 MCFD2Q8NI22 146 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 HRH4Q9H3N8 390 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 HSPB7Q9UBY9 170 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 CACFD1Q9UGQ2 172 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 SHPKQ9UHJ6 478 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 KMT2AQ03164 3969 aa11.24□□□□□ -0.61
TPM1-211ENST00000558314 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 VAMP1P23763 118 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 TNFSF8P32971 234 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 TMBIM6P55061 237 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 SUPT4H1P63272 117 aaKnown RBP11.23□□□□□ -0.61
TPM1-211ENST00000558314 PYDC2Q56P42 97 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 COQ8AQ8NI60 647 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 C1QTNF4Q9BXJ3 329 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 PFDN2Q9UHV9 154 aa11.23□□□□□ -0.61
TPM1-211ENST00000558314 H3BMM0 161 aa11.22□□□□□ -0.61
TPM1-211ENST00000558314 FAUP35544 74 aaKnown RBP11.22□□□□□ -0.61
TPM1-211ENST00000558314 TCTAP57738 103 aa11.22□□□□□ -0.61
TPM1-211ENST00000558314 SRPXP78539 464 aa11.22□□□□□ -0.61
TPM1-211ENST00000558314 GAMTQ14353 236 aa11.22□□□□□ -0.61
TPM1-211ENST00000558314 CSNK1G2-AS1Q8NCQ2 148 aa11.22□□□□□ -0.61
TPM1-211ENST00000558314 OR4B1Q8NGF8 309 aa11.22□□□□□ -0.61
TPM1-211ENST00000558314 DEFB131BA0A096LNP1 70 aa11.21□□□□□ -0.61
TPM1-211ENST00000558314 H3BMQ9 156 aa11.21□□□□□ -0.61
TPM1-211ENST00000558314 ID1P41134 155 aa11.21□□□□□ -0.61
TPM1-211ENST00000558314 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
TPM1-211ENST00000558314 WDR12Q9GZL7 423 aaKnown RBP11.21□□□□□ -0.61
TPM1-211ENST00000558314 MAGT1Q9H0U3 335 aa11.21□□□□□ -0.61
TPM1-211ENST00000558314 CCDC160A6NGH7 325 aa11.2□□□□□ -0.62
TPM1-211ENST00000558314 FABP1P07148 127 aa11.2□□□□□ -0.62
TPM1-211ENST00000558314 HLA-DRB4P13762 266 aa11.2□□□□□ -0.62
TPM1-211ENST00000558314 GPX4P36969 197 aaPredicted RBP11.2□□□□□ -0.62
TPM1-211ENST00000558314 NUP62P37198 522 aaPredicted RBP11.2□□□□□ -0.62
TPM1-211ENST00000558314 NKX2-1P43699 371 aaPredicted RBP11.2□□□□□ -0.62
TPM1-211ENST00000558314 RAB11AP62491 216 aa11.2□□□□□ -0.62
TPM1-211ENST00000558314 C12orf74Q32Q52 190 aa11.2□□□□□ -0.62
TPM1-211ENST00000558314 TOMM5Q8N4H5 51 aa11.2□□□□□ -0.62
TPM1-211ENST00000558314 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
TPM1-211ENST00000558314 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
TPM1-211ENST00000558314 FRAS1Q86XX4 4008 aa11.19□□□□□ -0.62
TPM1-211ENST00000558314 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
TPM1-211ENST00000558314 SNRPGP15A8MWD9 76 aa11.19□□□□□ -0.62
TPM1-211ENST00000558314 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
TPM1-211ENST00000558314 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
TPM1-211ENST00000558314 SCRT1Q9BWW7 348 aa11.19□□□□□ -0.62
TPM1-211ENST00000558314 SLC25A22Q9H936 323 aa11.19□□□□□ -0.62
TPM1-211ENST00000558314 F6UB75 175 aa11.18□□□□□ -0.62
TPM1-211ENST00000558314 WRBO00258 174 aa11.18□□□□□ -0.62
TPM1-211ENST00000558314 HOXB5P09067 269 aa11.18□□□□□ -0.62
TPM1-211ENST00000558314 AP3S2P59780 193 aa11.18□□□□□ -0.62
TPM1-211ENST00000558314 C7orf50Q9BRJ6 194 aaKnown RBP11.18□□□□□ -0.62
TPM1-211ENST00000558314 HTN3P15516 51 aa11.17□□□□□ -0.62
TPM1-211ENST00000558314 ATP5IP56385 69 aaPredicted RBP11.17□□□□□ -0.62
TPM1-211ENST00000558314 TMEM128Q5BJH2 165 aa11.17□□□□□ -0.62
TPM1-211ENST00000558314 EBLN2Q6P2I7 272 aa11.17□□□□□ -0.62
TPM1-211ENST00000558314 C16orf92Q96LL3 132 aa11.17□□□□□ -0.62
TPM1-211ENST00000558314 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
TPM1-211ENST00000558314 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
TPM1-211ENST00000558314 SAV1Q9H4B6 383 aaPredicted RBP11.17□□□□□ -0.62
TPM1-211ENST00000558314 SEPSECSQ9HD40 501 aaKnown RBP11.17□□□□□ -0.62
TPM1-211ENST00000558314 SMCO3A2RU48 225 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 H3BP45 60 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 M0R2N4 97 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 MED6O75586 246 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 SPART-AS1P0CW21 52 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms